| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0345 |
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| Symbol | |
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| ID | 5613896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 400647 |
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| End bp | 401804 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931177 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472086 |
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| Protein GI | 157373486 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.642173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA AATCCACTCA ACTTATGCTG TCCGCTGTAG CGACAGCTGT GGCAATGGCC
GGTTCGATCG GTTGTGCTCA GGCTCAGGAA GATGGGATTA ATATTGGTGG CTCGGTTCGG
GTCAACTATG GCCTGAAATT ATACGATGAC AGCTCAAAAG ACAAAGGCGG AGACCTGGTT
TTCGACACTG CGACCTTAGT CATGAAGGGA AAGAAGGGAG ATTTCGGCCT GGCCGCCGAA
TATCGTTTCA CCAAGAGCAC CAACTTTATC AAATATGGTT ACGGCTACTA TGATATAGAC
CCTGACTGGC AGCTCCAGTT TGGTATTAAC AAGGTTCCCT TCGGTAACCC TGGCTTTATC
TCTAATAGCT GGTGGTTTGG CCTGCCTTAC TACCTGGGCT TCGAAGATGA TCATGATATC
GGTATCAAGG CAGTTTATGA AAAGAATGGC TGGCATACGG ATCTGGCCTT CTATAAAGGC
GCCGAATATG GTCCGTCTGA GATCAAGCGC TACGCTACGG ATCTCTTCAC CGGCACCATA
GATACCACCT ATGACGGTAT CGACAATGGC ACCGAGTACA ACAACGAAGA GACGAATCAG
TTAAACCTCC GTCAAACCTA CACCATGGAG CATGAAGGCG GTTCGACCAC CTTTGGTGCA
TCGGTCGAAG CGGGCCAGAT CTACAACAAC AAAACCGGCA ACAATGGCGA CAGGTATGCC
GTTGCTGCGC ACATGGAGAC ACTCTACAAC GGTTGGAAGT TGCAACTACA GGCGATGCAG
TATGAGTATG ACGCCGCCGA TGCCGCAGAC GACAACAAGA TCGGTGTATC GGTCGTTAAC
TGGCAATATG AAATTGCCTC CAAGGGTCAG GTTTACAGCC TTAACCTCGC CAAGACAATG
CCAACATCAT GGGGTAGCGT TAAGTGTTAC AACGACTTCG GTTTAATGAC ACCCGATGTT
GCGGATTCAA GTTATGATGA CAGCATTCAA AATGTTACAG GCTGTGCGGT TTCAGCTGGC
CCGACTTACA CCATGATCGA TTTTATCATG GGCAAAAACA TGACATTCTC AACGAAGAAT
AATGACCATG TTGGCCTGCC TGAATTTGGC GACGATCTGG ACAAGCGTAT TAACATTAAC
TTCGGATATT ACTTCTAA
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| Protein sequence | MMKKSTQLML SAVATAVAMA GSIGCAQAQE DGINIGGSVR VNYGLKLYDD SSKDKGGDLV
FDTATLVMKG KKGDFGLAAE YRFTKSTNFI KYGYGYYDID PDWQLQFGIN KVPFGNPGFI
SNSWWFGLPY YLGFEDDHDI GIKAVYEKNG WHTDLAFYKG AEYGPSEIKR YATDLFTGTI
DTTYDGIDNG TEYNNEETNQ LNLRQTYTME HEGGSTTFGA SVEAGQIYNN KTGNNGDRYA
VAAHMETLYN GWKLQLQAMQ YEYDAADAAD DNKIGVSVVN WQYEIASKGQ VYSLNLAKTM
PTSWGSVKCY NDFGLMTPDV ADSSYDDSIQ NVTGCAVSAG PTYTMIDFIM GKNMTFSTKN
NDHVGLPEFG DDLDKRININ FGYYF
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