| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0317 |
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| Symbol | |
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| ID | 5609781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 370394 |
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| End bp | 371197 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931149 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472058 |
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| Protein GI | 157373458 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00282593 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGACAC GCGAGAGGTC TTATAGCACA TGGTTCGCAA CAGGTTTATC GCGAGGGAAA
AGCGTTTTCG GTTTACTCCT GCTGTTGAGC CTGAGCACAT TTAACGTTCA TGCGACACAA
TCTTCCAATT ATGACACTCT TTTTGAATCA TCAGCAGACA ATAAAAGGCT GCAGGCATTA
GCCGATCGGC TCATGATAGG AGAGAGCGCC AGCGGAAGCT TTACTCAATA CCGAACACTC
AAGGTTCTGA AGAAGCCCCT GATCAGTCAT GGACACTTTA TTTTTGATTC TCGACTCGGC
CTTGTGTGGC AACAGACTCA GCCCTTTGAA ACGACCCTGA TATTGAAAGA GGGGGAGTTG
ATACAGATAG ATAGCGCGGG CAGAAGGCAG GTATCCCAGG CAGGTTCCAA TCAGGGAGCC
GCAGCTATCG CGCAAACCAT GCCGAAGTTA CTGTCGGCAC TGCTGAGTGG TAACTTGAGC
GACTTGAGTG AGCACTTTAA CCTGTACCTC AAAGCCGACG ACACTCGAAA CGAGCCACAA
GAAGATGAAC CAGCTCATTG GCAGCTGGGG TTAATCCCTA AAGATCCTCT GCTCGTCAAA
GCTATCCCTC AAATGGTATT AGAGGGCGGG GAGCAGGTAT CGGCCCTGAT CTTACTGAGC
AACAGTGGAG ACAGTAGCAG AATTGAGTTT GAGCAGATAA GCAAGGCTCC ACTTTCGCAA
GAGCAGCGAC TCTTTTTATC AGATAGGCAG GGTGAGGATT CTCCTAAGGT TCAGCCTGAA
GCCAAGCCAG AACCTTATCC ATGA
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| Protein sequence | MKTRERSYST WFATGLSRGK SVFGLLLLLS LSTFNVHATQ SSNYDTLFES SADNKRLQAL
ADRLMIGESA SGSFTQYRTL KVLKKPLISH GHFIFDSRLG LVWQQTQPFE TTLILKEGEL
IQIDSAGRRQ VSQAGSNQGA AAIAQTMPKL LSALLSGNLS DLSEHFNLYL KADDTRNEPQ
EDEPAHWQLG LIPKDPLLVK AIPQMVLEGG EQVSALILLS NSGDSSRIEF EQISKAPLSQ
EQRLFLSDRQ GEDSPKVQPE AKPEPYP
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