| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0259 |
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| Symbol | |
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| ID | 5610632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 293459 |
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| End bp | 294094 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931085 |
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| Product | methyltransferase type 12 |
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| Protein accession | YP_001472000 |
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| Protein GI | 157373400 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.562572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACTCTT GTCCCCTCTG CGGGAGGGCC TCGCTATTCT TTTTCTATCA AGATAAACGC
AGATCCTATC TGAGATGCAA TCATTGCCAT ATAGTCGTTG TCCCTCCTGA GTACCTTCTC
TGCGCCGAAG CCGAAAAATC TGTCTATGAT CAGCATGAAA ATGATCCGCA GGATAAAAAG
TATCGCCGCT TCTTATCCCG GACTTTTGAG CCGCTTATTG CGCTGCTTCC TGATGACGCT
AAGGGATTAG ATTTTGGATG CGGCCCGGGA CCTACGATAA GCGTGATGGC TGAGGAGGTA
GGACTGTTGG TGAGTAACTA CGATCTTTAC TACCACAATA CCCCCGAGGT GCTGGAGCAC
TATTATGATT TTGTCACCAT AACCGAAGTG ATAGAACACG TTGCCGATGC TAAGGCGTTG
TTGACGCGTT TAGACTCCTT ACTCTCTTCC GGAGGGGTCT TGGCTGTGAT GACCTCCAGA
ATGGTAGACG CAGGTGCATT TGGCCAGTGG TATTATAAGA ACGACCCGAC ACATATTCGT
TTCTATTCCA TCGAAACCTT TGAGTGGGTC GCCCATCATT TTGACTGGCA CTTAGAGATA
GTCGATAGGG ATGTGGTGTT TTTTCATAAG AAGTGA
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| Protein sequence | MNSCPLCGRA SLFFFYQDKR RSYLRCNHCH IVVVPPEYLL CAEAEKSVYD QHENDPQDKK
YRRFLSRTFE PLIALLPDDA KGLDFGCGPG PTISVMAEEV GLLVSNYDLY YHNTPEVLEH
YYDFVTITEV IEHVADAKAL LTRLDSLLSS GGVLAVMTSR MVDAGAFGQW YYKNDPTHIR
FYSIETFEWV AHHFDWHLEI VDRDVVFFHK K
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