Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0246 |
Symbol | |
ID | 5613541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 280092 |
End bp | 280697 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640931072 |
Product | methyltransferase type 11 |
Protein accession | YP_001471987 |
Protein GI | 157373387 |
COG category | [R] General function prediction only |
COG ID | [COG4798] Predicted methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTGGCTT TCTTTGAGAT TGAGCAAGGG CAAACTGTCT TAGATCTCTT CTCCGGAGGT GGCTATTACT CCGAACTTCT CTCTTATGTT GTCGGAGGAG AAGGGGAAGT TATTGCTCAC AATAATCAGG CTTACCTTCC TTTTGCGAAA GAAGATCTCG ATGAACGCAG TTATGCCACT AGGCTGCCGA ATGTCACTCC CTTGTTAAGC GAGGCTAATG ATCTGAATTT TGCGGCAGAT TCTCTCGACA GAGTTTTTTA TATTCTGGGG TTTCATGATA TCTATTACCG TGATGAAACC TGGCCCGAGA TTGATGATGA CAAACTGGTT GCCAATCTAT TTCATAGTCT TAAGCCGGGC GGAATTATTG CGGTAATCGA TCATGATGCC GTTTCCGGTG CAGGGAAAGA GACGGCACAG GAGTTTCATC GATTATCATC AGAGCATGTC ATTAGCAAGA TGACTCAGGC AGGGTTTGTA TTAACCGATA GCGCCGGTCT TCTTAAGAAT GATGCAGACC CACTTACCAT CTCAGTGTTC GATAAGGCAA TCAGAGGGAA GACGAGCCGC TATATGTTGA AGTTTACAAA ACCGCAGACA AACTAA
|
Protein sequence | MLAFFEIEQG QTVLDLFSGG GYYSELLSYV VGGEGEVIAH NNQAYLPFAK EDLDERSYAT RLPNVTPLLS EANDLNFAAD SLDRVFYILG FHDIYYRDET WPEIDDDKLV ANLFHSLKPG GIIAVIDHDA VSGAGKETAQ EFHRLSSEHV ISKMTQAGFV LTDSAGLLKN DADPLTISVF DKAIRGKTSR YMLKFTKPQT N
|
| |