Gene Ssed_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0246 
Symbol 
ID5613541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp280092 
End bp280697 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content45% 
IMG OID640931072 
Productmethyltransferase type 11 
Protein accessionYP_001471987 
Protein GI157373387 
COG category[R] General function prediction only 
COG ID[COG4798] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGCTT TCTTTGAGAT TGAGCAAGGG CAAACTGTCT TAGATCTCTT CTCCGGAGGT 
GGCTATTACT CCGAACTTCT CTCTTATGTT GTCGGAGGAG AAGGGGAAGT TATTGCTCAC
AATAATCAGG CTTACCTTCC TTTTGCGAAA GAAGATCTCG ATGAACGCAG TTATGCCACT
AGGCTGCCGA ATGTCACTCC CTTGTTAAGC GAGGCTAATG ATCTGAATTT TGCGGCAGAT
TCTCTCGACA GAGTTTTTTA TATTCTGGGG TTTCATGATA TCTATTACCG TGATGAAACC
TGGCCCGAGA TTGATGATGA CAAACTGGTT GCCAATCTAT TTCATAGTCT TAAGCCGGGC
GGAATTATTG CGGTAATCGA TCATGATGCC GTTTCCGGTG CAGGGAAAGA GACGGCACAG
GAGTTTCATC GATTATCATC AGAGCATGTC ATTAGCAAGA TGACTCAGGC AGGGTTTGTA
TTAACCGATA GCGCCGGTCT TCTTAAGAAT GATGCAGACC CACTTACCAT CTCAGTGTTC
GATAAGGCAA TCAGAGGGAA GACGAGCCGC TATATGTTGA AGTTTACAAA ACCGCAGACA
AACTAA
 
Protein sequence
MLAFFEIEQG QTVLDLFSGG GYYSELLSYV VGGEGEVIAH NNQAYLPFAK EDLDERSYAT 
RLPNVTPLLS EANDLNFAAD SLDRVFYILG FHDIYYRDET WPEIDDDKLV ANLFHSLKPG
GIIAVIDHDA VSGAGKETAQ EFHRLSSEHV ISKMTQAGFV LTDSAGLLKN DADPLTISVF
DKAIRGKTSR YMLKFTKPQT N