| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0219 |
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| Symbol | |
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| ID | 5613304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 250086 |
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| End bp | 251708 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931045 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001471960 |
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| Protein GI | 157373360 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA AAGGTTTTTT TTCCTGGTTT CGCAAAGATA AGTCGAAAGA TGAAGTTAGT
GCGCCAGAAG CAGAAGTTGT AACTGAATCA CAAGATGCTG TCGAAGCTGA GGCGCTTTCC
GAAGAACAGG CTAAGCAAGC CGAGCAGGCA CGTATCGAGG CTGAAGCTCT AGCACTTGCC
GAAGAGCAGG CCGAGCAGGC TCGTATCGAG GCAGAAGCTC TGGCACTTGC CGAAGAGCAG
GCTAAGCAAG CCGAGCTGGC ACGTATTGAG GCTGAAGCTC TCGCACTTGC CGAAGAGCAG
GCTAAGCAAG CCGAGCAGGC ACGTATCGAG GCTGAAGCTG CAGCACTTGC CGAAGAGCAG
GCTAAGCAAG CCGAGCAGGC ACGTATCGAG GCTGAAGCTG CAGCACTTGC CGAAGAGCAG
GCTAAGCAAG CCGAGCAGGC ACGTATCGAG GCAGAAGCTG CGGCATTGGC CGAAGAGCAA
GCTAAGCAAG CCGAGCTGGC ACGTATCGAG GCAGAGGCTG CGGCATTGGC CGAAGAGCAA
GCTAAGCAAG CCGAGCAGGC ACGTATCGAG ACAGAGGCTG CGGCACTTGC CGAAGAGCAG
GCAAAGCAAG CCGAGCTGGA CGCTGAACAA GTGGCGGCAG AGCAAGAAAC CGAAAAACAA
CCAGAGCCTC AGGAAAAACC CACCAAAGAG GGCTTTTTCG CTCGCCTTAA GCGAGGTCTT
AAACGCACGA GTGAAAATAT CGGTAGCGGG TTCGTTAGCC TGTTTAGCGG TAAGAAGATC
GATGATGATC TTTTCGAAGA GCTTGAAGAA CAGTTGCTTA TTGCGGATGT CGGTGTTGAA
ACAACAACAC GGTTAATCGA TAGTCTGACC GAGCAAGCTA GTCGTAAACA GTTAAAAGAT
GGTGAAGCTT TATATGAAAT TTTGCGTGAT GAGATGCAAA AGACATTAGA GCCTGTCTCA
ATCCCACTCG TTCCTGAAAG TGCCGACGGA CCTTTTGTTA TCCTGATGGT CGGTGTGAAT
GGGGTCGGAA AAACGACGAC AATTGGTAAA CTGGCTAAGC AATATCAGGC GCAAGGTAAG
TCCGTAATGC TGGCTGCCGG TGATACCTTC CGTGCGGCTG CGGTTGAGCA GTTACAGGTG
TGGGGACAGC GAAATGACAT TCCTGTCGTG GCACAACATA CTGGTGCCGA TAGTGCATCG
GTGTTGTTTG ATGCACTTCA GGCGGCTCGT GCTCGTAATA TTGATATTTT GATCGCCGAT
ACCGCGGGTC GACTTCAGAA TAAGGCACAT CTGATGGATG AGCTGAAGAA GGTTATCCGA
GTGATGAAGA AGCAAGATGA GTCCGCGCCC CATGAGGTTA TGTTGACCTT AGATGCGAGC
ACTGGCCAAA ATGCAATTAG TCAGGCAGAG TTATTTAAAA AAGCGGTTGG TGTTACCGGC
ATCACAATCA GTAAGCTTGA TGGTACTGCT AAAGGCGGTG TGATTTTTGC TATTGCCGAT
AAGTTCGGTA TTCCTATCCG TCATATCGGT GTCGGTGAGC AGATCGATGA TCTACGCACC
TTCGATGCCA AAGATTTTGT CGATGCGCTT TTTACTCAAG AGAGTGATGA GAATAAGTCG
TAG
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| Protein sequence | MAKKGFFSWF RKDKSKDEVS APEAEVVTES QDAVEAEALS EEQAKQAEQA RIEAEALALA
EEQAEQARIE AEALALAEEQ AKQAELARIE AEALALAEEQ AKQAEQARIE AEAAALAEEQ
AKQAEQARIE AEAAALAEEQ AKQAEQARIE AEAAALAEEQ AKQAELARIE AEAAALAEEQ
AKQAEQARIE TEAAALAEEQ AKQAELDAEQ VAAEQETEKQ PEPQEKPTKE GFFARLKRGL
KRTSENIGSG FVSLFSGKKI DDDLFEELEE QLLIADVGVE TTTRLIDSLT EQASRKQLKD
GEALYEILRD EMQKTLEPVS IPLVPESADG PFVILMVGVN GVGKTTTIGK LAKQYQAQGK
SVMLAAGDTF RAAAVEQLQV WGQRNDIPVV AQHTGADSAS VLFDALQAAR ARNIDILIAD
TAGRLQNKAH LMDELKKVIR VMKKQDESAP HEVMLTLDAS TGQNAISQAE LFKKAVGVTG
ITISKLDGTA KGGVIFAIAD KFGIPIRHIG VGEQIDDLRT FDAKDFVDAL FTQESDENKS
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