| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0207 |
|---|
| Symbol | |
|---|
| ID | 5611487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 235685 |
|---|
| End bp | 236098 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640931033 |
|---|
| Product | globin |
|---|
| Protein accession | YP_001471948 |
|---|
| Protein GI | 157373348 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1017] Hemoglobin-like flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGA CTCAAAAACA GATCCTTTTA GTACAACACT CATTCTCTCA GGTAGAGCCC
ATAGCAGAGC AAGCCGCCGA TATTTTTTAT GGTGCTCTTT TCGAGATAGA CCCCTCACTC
AAACCTCTTT TTCGAAGCAA TATAAAAATG CAGGGGCGCA AGCTGATGTC AATGTTAAAA
GCTGCCGTAG ACGGGTTAAA CGATCTCGAT TCCTTAGTGC CTGTTCTGCA GCAATTAGCC
GAGAGACATA ATGGCTACGG CACGAAGAAA AGCCACTTCA CTCCGGTAGG AAACGCCTTA
CTCTATACCC TGAAGACCGG GTTGGGGGAA GCCTATACTG AGGAGGTAAG ACAGGCGTGG
ATCACGGTTA TTCATCTGGT CGCCGATACG ATGAAACCAG AGATCACAGC CTGA
|
|---|
| Protein sequence | MSLTQKQILL VQHSFSQVEP IAEQAADIFY GALFEIDPSL KPLFRSNIKM QGRKLMSMLK
AAVDGLNDLD SLVPVLQQLA ERHNGYGTKK SHFTPVGNAL LYTLKTGLGE AYTEEVRQAW
ITVIHLVADT MKPEITA
|
|---|
| |