| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0203 |
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| Symbol | |
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| ID | 5614077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 231551 |
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| End bp | 232576 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931029 |
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| Product | AraC-type transcriptional regulator |
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| Protein accession | YP_001471944 |
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| Protein GI | 157373344 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGA TGAAATTTAA TACCTCCTTT ATTCGCGTCT GTTATGTGAA ACCCGTTTTT
GATGGCGTCG AGCAGGTTTA TGGTCTCAAT CACCGGGCCC TGTCAATTCC CGATGCGCTG
ATGAACGAGC CTATGGCCTT GATCCCTTTT ACCCAGTTTG GTGAATGGTT ATCTGAGTTA
GCCCTCCTTA CTCAAGACCC CGCTTACATA GTTAAACTAG AACAACAGCT AAACTTCGAC
CGACTCGATA TCAGCGGCAT CGACCTGTTA TCGACCCCGG ATCTGGCCAT GAGTATACGT
CGCATCAACT ATGGCATCGT CAGCCTGCAA TCCGGCGGCA GTTACTATGT CAGTATGTCC
GGAAAGATAA TGAAATGGTG CTATAAAAAT CCCTACGCCT TTAAGCAGGA GAAAAGCTAC
GACTCTCTCA GGGTCGCCAT CATGCTGCTT AATGCACTGC GTCACTTTCT GGGTGGTAAA
TATCGCCCGA TTCAGGTACG TATCAGTGGT TCGGCTGTCG CGCAGCGGGA GACGGAACAC
CTGTTTAAAT GCCCGGTTAT CTGGAATGCT GCGCAAACTG AAATTTGGTT GGAACTTGAT
GATATGCTGC AGCCTTTGAT AGAGCCGCAG TTAGAAAACA GCCCGGTGAC CATGACACGT
TCGCTATTTG AAAAGTACCT CAATATGCCG CAACCCCACG ACACCCCGAA GGTGCTTTTC
GAAATGGTCA ATTATGCAAG ATTTTATGGT TTACCTAAGA TCGAAGATAT TGCCAAACTC
TTCAATATCT CTAAGCAGCA GCTGCAGAGG CGATTACAGC AGCAAGGTTT CACTTTTTCT
GCCTTGTGTA GTTACATCTA CAGTAATCAA GCCATCAAAT ATATGCTCGA TGGTAAGAGT
GTCGCGGAAA TTAGCCCCCT TTTGGGATAT GCGAATCAGC AAAGCTTCAG CCGAGCCTTT
AAACGACTCA GAAAATGTAC CCCTCAGCAA TATCTCGACA GGCTCAACCA AAACAAGCCT
GATTAA
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| Protein sequence | MLPMKFNTSF IRVCYVKPVF DGVEQVYGLN HRALSIPDAL MNEPMALIPF TQFGEWLSEL
ALLTQDPAYI VKLEQQLNFD RLDISGIDLL STPDLAMSIR RINYGIVSLQ SGGSYYVSMS
GKIMKWCYKN PYAFKQEKSY DSLRVAIMLL NALRHFLGGK YRPIQVRISG SAVAQRETEH
LFKCPVIWNA AQTEIWLELD DMLQPLIEPQ LENSPVTMTR SLFEKYLNMP QPHDTPKVLF
EMVNYARFYG LPKIEDIAKL FNISKQQLQR RLQQQGFTFS ALCSYIYSNQ AIKYMLDGKS
VAEISPLLGY ANQQSFSRAF KRLRKCTPQQ YLDRLNQNKP D
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