| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0170 |
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| Symbol | |
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| ID | 5610327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 192343 |
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| End bp | 192834 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640930996 |
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| Product | transcription elongation factor GreB |
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| Protein accession | YP_001471911 |
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| Protein GI | 157373311 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA TGTTAATTAC CCGCAAAGGC TGGCAGGCCT TAGATAAAGA ACTCAAATAT
CTGTGGAAAG AGTATCGCCC CGAGATCACC AAGAAGGTGC AGGAGGCTGC GGCTCAAGGT
GACCGATCCG AGAACGCCGA TTACACTTAT AACAAAAGGC TTTTACGTCA AATAGATAGC
CGGGTCCGTT ATCTGGTTAA GCGGGTCGAA GAGCTGCAGA TCGTAGATTA CTCGCCTCAG
CAGGAGGGAA AGGTATTCTT CGGCGCTTGG ATCGAGCTGG AAAATGAAGC GGGCGAGATA
GTTCAGTACC GCATCGTGGG TAAAGACGAG CTGGATACTA AGCTGGGCTA CATCACCATA
GACTCGCCCA TGGCCCGTGC GCTTATCGGC AAGCAGGTGG ACGATGAGGT GGTTGTCCCG
ACGCCATTGG GGCCTAAGGA GTGGTACATC AACAAGATCC AATATAAGTC TTTTGAAGAT
CCTCAGAATT AG
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| Protein sequence | MKAMLITRKG WQALDKELKY LWKEYRPEIT KKVQEAAAQG DRSENADYTY NKRLLRQIDS
RVRYLVKRVE ELQIVDYSPQ QEGKVFFGAW IELENEAGEI VQYRIVGKDE LDTKLGYITI
DSPMARALIG KQVDDEVVVP TPLGPKEWYI NKIQYKSFED PQN
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