| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0148 |
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| Symbol | |
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| ID | 5610998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 167248 |
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| End bp | 167898 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640930974 |
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| Product | glutathione S-transferase domain-containing protein |
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| Protein accession | YP_001471889 |
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| Protein GI | 157373289 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0625] Glutathione S-transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.959935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGT TTTACCACCC ACTTTCCCGT TATTCACAGA AAGTACTGAT TGCGCTCTAT
GAAAAACAAG CCAATTTTTA TCCACGGGTT ATTGAGTTAT CGGATCCACT ATCCAGACGA
GAGTTTTGTG ATTTCTATCC ACCGGGAAAG CTCCCCCTGC TTAAGAGTAA GAGTGGTGAG
CTGATTCCTG AGTCCAGCAT AATTATCGAA TTTATCGATA GTGAGTTTTC TACCGGGACA
CGACTCTTTC CTATCGATAG AAGGATTGCA CTCGATACTA GATTACAAGA TCGCTTAATC
GACAATGATT TCAGTAATGT ACTCTTCGAA CTGGAACATC AAAAACTAGA GGATGGCGAT
CAAAACCATA TAATGATTAA GCAACTTGAG AATGATATCA GTCAGTTTCT TGGTTATCTG
GACAAAAAGT TAGAGAAAAA TCACTGGTTA TGCTCAGACG GCTTAACTTT GGCTGATTGT
GCCCTGTTTC CCTGTCTGCA TTGTGCTCAG GACTATTTTA AACTCTTTCA ATATGACAAT
CTGAATCGAT ACTGGCATCA GGCTCAGCTC AGAGGGTCAT ATCTACAGGT CAAAGAGGAG
GTTGAGTTGG CCGCGGGTGA CGTACTATCT GGCCGTAGAC CCATTCCTTA G
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| Protein sequence | MELFYHPLSR YSQKVLIALY EKQANFYPRV IELSDPLSRR EFCDFYPPGK LPLLKSKSGE
LIPESSIIIE FIDSEFSTGT RLFPIDRRIA LDTRLQDRLI DNDFSNVLFE LEHQKLEDGD
QNHIMIKQLE NDISQFLGYL DKKLEKNHWL CSDGLTLADC ALFPCLHCAQ DYFKLFQYDN
LNRYWHQAQL RGSYLQVKEE VELAAGDVLS GRRPIP
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