| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0127 |
|---|
| Symbol | |
|---|
| ID | 5612342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 142251 |
|---|
| End bp | 142721 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640930953 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_001471868 |
|---|
| Protein GI | 157373268 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3375] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAACG TAGAGATAGA AACAACGACT GAGCTTACCC CAGATCTGCT GAACTGCTTA
CTCGATATAC ATCGACAGAT CCCTGAATTT GATAAGCCAT ATCCTGAATC AGAGTATCAA
GTACGGCTTA ATCATAAGCC TATACTGATC ATGTTTATCA GAGTAGAAGG TGAACTTGCA
GGTTTTAAGC TAGGGTACGA ACTCAATGGC TCTACTTTCT ATAGCTGGCT GGGAGGTGTG
ATTCCAGAGT ATCGAAATTT AGGTTTAGCC CAGCACCTGC TACAGGCTCA AGAATCTTGG
GCCAGAGAAA GTGGATATCA ACAGATAGAA GTTAAAACCC TGAACCGGTT TTCATCTATG
TTAGCCATGC TAACCGCCAG TCGATATCAA ATCACCAACA TGACTCAAGC GACTGATAAA
GTTGAAAATA ATAAGATAAA ACTACAAAAA TCACTCATAG AAGCAGTGTA A
|
|---|
| Protein sequence | MYNVEIETTT ELTPDLLNCL LDIHRQIPEF DKPYPESEYQ VRLNHKPILI MFIRVEGELA
GFKLGYELNG STFYSWLGGV IPEYRNLGLA QHLLQAQESW ARESGYQQIE VKTLNRFSSM
LAMLTASRYQ ITNMTQATDK VENNKIKLQK SLIEAV
|
|---|
| |