| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0122 |
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| Symbol | |
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| ID | 5612444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 135873 |
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| End bp | 136592 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930948 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001471863 |
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| Protein GI | 157373263 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.487238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCAAAT TAGTCGCTAA TAATCTAGAG ATGAAGTTTG GTGAAAGACA TATATTCAGT
GTCGACAGGC TTCAGTTGTC TCAGGGACAA ACGATACACC TTCAGGGCGA TAACGGTTGT
GGAAAGACCA CCCTGATGAA ACTGCTTGCC GGTCTGATAT CTCCCAGCAG AGGGGCCATA
ACAACTGAAG GCTTCGAGCC ACTGCCATGG TGGCGTTCCA ATGCCTTGTT AGGCAAAGCC
GTCTATCTAC ATCAACATCC GTATCTGTTC GATGGCAGCG TCGAATATAA TCTGAGTTAC
CCTCATCCGT TTTGCAACAT GACAAAACAG CAACTGAGTG ATCGCACCCA AACTGCAATT
GAGATGGCTG AGTTAACTCA TCTCAAAAAC CAAGCGGCAT CGAGCCTATC GGGTGGTGAA
AAACAACGGC TCGCTATCGC CAGAGCCTGG ATAATGCAGC CTAAGTTATT AATGTTAGAT
GAGCCTACAT CCAATATGGA CAGGTTTTCA CAAGACTTGG TTTTGGCCAT GATCTCCGAT
CTTCAACAGC TTGGAACGGG AATGTTAATC AGTAGCCACC AATCTTGTGT GCTAACCAGT
TTATGCAATC AAACCTGGGT CATTGAAAAT CAACATATAA TGTCATCTTC CACGGCGGAC
AATATTCCAG CCTCAGCTCC AATAAATCTA CAGGAACCAA GATATGTCAT TGCAAATTGA
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| Protein sequence | MVKLVANNLE MKFGERHIFS VDRLQLSQGQ TIHLQGDNGC GKTTLMKLLA GLISPSRGAI
TTEGFEPLPW WRSNALLGKA VYLHQHPYLF DGSVEYNLSY PHPFCNMTKQ QLSDRTQTAI
EMAELTHLKN QAASSLSGGE KQRLAIARAW IMQPKLLMLD EPTSNMDRFS QDLVLAMISD
LQQLGTGMLI SSHQSCVLTS LCNQTWVIEN QHIMSSSTAD NIPASAPINL QEPRYVIAN
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