| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0112 |
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| Symbol | |
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| ID | 5612859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 125937 |
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| End bp | 127007 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640930938 |
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| Product | glycerol dehydrogenase-like protein |
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| Protein accession | YP_001471853 |
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| Protein GI | 157373253 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAGACT TCACAAGGAA GCTCAACACT CGACACTTGG AGTTTCCTGC CCAGTTGCTC
GTTGAGAAAA ATGCGATAGC AAATACGCCT CTGTTATCAA ACTTACCACT TTCCCAAGGG
GTACTGCTGG CCATAGATGA TGGTGTGAAG ACATTGGCTG AACAGGTTTT ACCCCATTTA
TGGGCCAGTA AAAGCTGCAC TACACATGTA ATAGAAAAAG CTGACTTTAC TAATGTATCT
CAAATCGATG CCATTTGTGC AGAGCGACAA ATCGAGACCG TCGTGGCTTT CGGTGGAGGA
AAAGTTCTCG ATGTATGCAA ACGGTTAGCA AGCCTACGTC ATATTGAACT CATTGTAATA
CCGACAGCAC TTTCCAGCGA TTGTGTCTCT TCGCCTATTG CCGTAATTTT TGATGAATCA
GGAAAAAAGC TCAGCCTGCC TGCTGCAATT CCCAATGTCA TCATCGTCGA TACAAAGCTC
TGCTCTCAAG CACCGAGGCG CCTTACTCAA GCAGGTATTG GCGATCTTCT TTCAAACTAT
TGTGCATTAC TTGATATGAA CTATGCCAAA GACAGAGCCG ATGTTGATGG TTTTTCCTAT
CTGCTCGCCA AATCTGCGGC AAATGAGATT GTGGGCATGC AGCACCTGTC ACTCACAGAT
CAAGCTGTGA TCACTCAGCT CGCCGAAGGA CTTATTTTGT CTGGGTTGGC GATGGGATTT
TCGGGAGACT CTCGCCCCTG TTCCGGCGCA GAACATTTGA TTAGCCATGC ATTGGATTTT
CTTAACCTTG GAGATGGTTT ACATGGCGAA CAGGTAGCAC TGGGAATGAA GTTTTGCCAT
CACCTAAGAT TACTCCTGAA TCTACCAGCC CTAAATCCTT CAGTATTAGC ATGTATTGAT
GGCTTCAATA TTCGCAGTAC CCCCGATTCA TTAAACATCA GCAAAAATGA ATTTTTTGAA
GCATTAGCTA TCAGCCCTGA AATGCGCAAA GGTCGTATGA CATTTTTAGA GAAACAAAAC
TCTATACCTA AGGCCCAACT AGAAAAAGCA TATATAAATG CATTTGAATA A
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| Protein sequence | MSDFTRKLNT RHLEFPAQLL VEKNAIANTP LLSNLPLSQG VLLAIDDGVK TLAEQVLPHL
WASKSCTTHV IEKADFTNVS QIDAICAERQ IETVVAFGGG KVLDVCKRLA SLRHIELIVI
PTALSSDCVS SPIAVIFDES GKKLSLPAAI PNVIIVDTKL CSQAPRRLTQ AGIGDLLSNY
CALLDMNYAK DRADVDGFSY LLAKSAANEI VGMQHLSLTD QAVITQLAEG LILSGLAMGF
SGDSRPCSGA EHLISHALDF LNLGDGLHGE QVALGMKFCH HLRLLLNLPA LNPSVLACID
GFNIRSTPDS LNISKNEFFE ALAISPEMRK GRMTFLEKQN SIPKAQLEKA YINAFE
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