| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0105 |
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| Symbol | |
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| ID | 5612685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 119268 |
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| End bp | 119990 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640930931 |
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| Product | 3-deoxy-D-manno-octulosonic-acid kinase |
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| Protein accession | YP_001471846 |
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| Protein GI | 157373246 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTA AACAAACCTC ATCAGGCGCT ATCGCATATT GCGATGCCAC GCCTGAAACC
ATCTCAGTGC CGTGGTTTAC CTTCGATTAC TGGCAGAGCC AAGGTGCTAT AACAGGTTCA
TCAAAGGGCC GATACACCAC CTGGTTTGTT AAACCCAATA TGGCTGAGAC AGACAAGAGT
GAATGGGTGC TGCGCCACTA CTATCGCGGT GGGCTGATGG AAAAGATCAG CAAGGACTCC
TATTTTTACA CCGGTCTGAA AAACACCAGA GCGGTGGCTG AGTTATCACT ATTAGAATTG
CTGTATAGCG AAGGATTTGA AGTCCCCCGC CCCATCGCCG CCAACGTAGA GAGAAACGGT
CTCTATTATC GCGCCGATAT CATTATCGAA CGCGTGGAGG GGGCCCAAGA TCTGGTGGCC
CAACTGAGCA AGTCGCCGAT GTCAGATCTA CAATGGCAGC AACTAGGTGC CTGTATCGCT
AAATTCCACC AGCGAGGGGT CTATCATGCC GATCTCAACG CCAAGAATAT CCTTATCACA
CCAGATAAAT TCTACCTTAT CGACTTCGAC AGAGGTGAAA TTCGCACGCC AAACCCCAAG
TGGCAAGGTG CCAACCTGGA GAGGTTGTTA CGCTCCTTCA GGAAGGAGCT GGCTAAGCTA
CCAACTTTAG CCTTCAATGA GACCAATTGG CAAAGTTTGA TGCAGGGATA TTCTAACCCT
TAG
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| Protein sequence | MQIKQTSSGA IAYCDATPET ISVPWFTFDY WQSQGAITGS SKGRYTTWFV KPNMAETDKS
EWVLRHYYRG GLMEKISKDS YFYTGLKNTR AVAELSLLEL LYSEGFEVPR PIAANVERNG
LYYRADIIIE RVEGAQDLVA QLSKSPMSDL QWQQLGACIA KFHQRGVYHA DLNAKNILIT
PDKFYLIDFD RGEIRTPNPK WQGANLERLL RSFRKELAKL PTLAFNETNW QSLMQGYSNP
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