| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0081 |
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| Symbol | |
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| ID | 5613447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 90188 |
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| End bp | 91054 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640930907 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471822 |
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| Protein GI | 157373222 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1868] Flagellar motor switch protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA CGGCGAAAGC ATGTTTACTT AAAGCTTCTC GGTGTGAGCG GGTTAGACCT
GTTGCATTAA TTCAGGAGAA GTTAGCCCGT AGTCGGTTAT TGATTCAAGT TGATGCTTGT
CAGCGCTCCT TTCTTGAGGC GGCTAATGGG GTGCTCAACC CCATTATCAG ACAGGGTCAT
CATGCGTTAT CGAGTATTTC ATTGACCGAC AGTGATCAGT CCGTGGTACC CGATATCAAT
AATGGCTGGT TTCTACTTCG TTATCAGCGG CTGCCTTTGG CGTGGTGGCG AATCGATAAA
TGTACTCTGG ACCAATTGGC TAGTGGCTAT TATGGAAGTC TGGCGACTCT CTTGAAGTCT
CCTTTGCGAG CCCCCAGCCA ATCGGAGTTT AGATTGGCAA AAAAATTGAT GCTTGCCGCG
CTCAAGGTTC TGCCTACAGC AGAGCTTGAT GAAAATGCAT TAGAGCTGGA GTTGGTGGTC
AATAGTACGC CTATCGATTC ACCTGTGATT TGGGAGATAG CTTTTCCGGT AGAGCATAAG
GTGGCTCCTA TGTTGTTTTG TATGACTGAA CACCTACTGG GATTAATGTC TGAGCAGCCT
AGCCAATACA TGGCAACACC TGATTTAGCC GAAAAGCTCT CATATCGCCT GAGGCAGATC
CCCATAAAGA TATTGTTTGA ACTTGGTCGT CAAAGCACGC CGGTGACTTC ACTTCATGGC
CTTGAAGTTG GTGACATATT ACCCATGAAT TTACATTCTC GCTGCCCGGT AACAGTGGGA
AAGCGACCTC TTTTTTACGC TGCAATTCAT ACCCATGATG GCCAGATGGT TGCCAAATTA
GCCCAGGATA TTTATCAGCA AGGATAG
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| Protein sequence | MKTTAKACLL KASRCERVRP VALIQEKLAR SRLLIQVDAC QRSFLEAANG VLNPIIRQGH
HALSSISLTD SDQSVVPDIN NGWFLLRYQR LPLAWWRIDK CTLDQLASGY YGSLATLLKS
PLRAPSQSEF RLAKKLMLAA LKVLPTAELD ENALELELVV NSTPIDSPVI WEIAFPVEHK
VAPMLFCMTE HLLGLMSEQP SQYMATPDLA EKLSYRLRQI PIKILFELGR QSTPVTSLHG
LEVGDILPMN LHSRCPVTVG KRPLFYAAIH THDGQMVAKL AQDIYQQG
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