Gene Spro_4957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4957 
Symbol 
ID5602415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009829 
Strand
Start bp44291 
End bp45409 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content45% 
IMG OID640930820 
Productbaseplate J family protein 
Protein accessionYP_001471725 
Protein GI157362866 
COG category[R] General function prediction only 
COG ID[COG3948] Phage-related baseplate assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value0.466467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.870865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC GTGGTAATTT GCCTGAAATT AATTTCGCCG AAAAATCCCC TGAAATCACC 
GTCAATGAAG CGATCACTGT TTTCGAAAAG TTGAGCGGAG AAACATTGGC ACCTGCAGAC
CCCCGCAGGG TATTCATTGA ATCGCTTTGT TATATCATTG CCCAACAACG CGTCATTATT
GATCACTCAG CAAAAATGAA CTTGCTTAGC TACTCCGAAG GGAAATATCT GGATGTGCTG
GGGTATTTTC TGGATGTGAC GCGATTACCT GCCCAATCGT CCGTAACAAC ACAGCAATTT
GAGTTGGAAA CCGCACAAAT CAGTGCCTAT GTCATACCTG TAGGCGCACA GGTTACGACG
GGTTCAAGGG TGTTTGAGAC CACTGAAGTC TTGGAGATAC CTATAGGCGC ACTGACCGGC
GTTGTTCCCG TCAGAGCCGT TGATGCAGGC GCGGGTGGAA ATGGCTTGTT GCCAGGCCAG
ATTAATACAC TGATCACGCC GTTGCCCTAC ATCAAAAATG TAACGAACCT GACAACAACC
AGTGGCGGCG CAGACGTTGA GAATGATGAT AATTTTGCTG AACGGATACA CTTAGCCCCT
GCGTCGTTCT CGGTGGCTGG CCCCGAGGAT GCCTACAAAT ATTGGACGCG CACAGCGAAT
CAGGGCATTA AAGCTGTTTC GGTAAATTCT CCGACACCCG GCGTGGTAGA TGTCAGGTTT
TTAATGGCTG GTGGTATTTT CCCTAGTCAG GAAGTCATGG ATGAAGTGAA TAGCGTCTTG
AATGCGAAAA CTATTCGCCC GTTGACAGAT AAAGTTAATA TATTACTGCC TAATAATATT
GATTATGAAA TAGACATTGA ATACTGGATA TCCAATGAAA ATAAAACGCA AGCAGATTTA
ATTCAGAAGG ATGTTAAAAA GGCCGTTGAG AATTACGCTC TTTGGCAGCG CTCTGAATTT
GGCCGAGACA TTAACCCTGA TATGTTAAAT AACTTGGTTG TTTCCGCTAG AGCTAAACGC
GTCAATATAA TAAGCCCGAA ATTCACCGTT TCAGAAAAAG TCGACGTGGC GCAAGATATT
AATATGAAAA TCACATTTAA GGGGCTGGAG GATGGTTGA
 
Protein sequence
MIPRGNLPEI NFAEKSPEIT VNEAITVFEK LSGETLAPAD PRRVFIESLC YIIAQQRVII 
DHSAKMNLLS YSEGKYLDVL GYFLDVTRLP AQSSVTTQQF ELETAQISAY VIPVGAQVTT
GSRVFETTEV LEIPIGALTG VVPVRAVDAG AGGNGLLPGQ INTLITPLPY IKNVTNLTTT
SGGADVENDD NFAERIHLAP ASFSVAGPED AYKYWTRTAN QGIKAVSVNS PTPGVVDVRF
LMAGGIFPSQ EVMDEVNSVL NAKTIRPLTD KVNILLPNNI DYEIDIEYWI SNENKTQADL
IQKDVKKAVE NYALWQRSEF GRDINPDMLN NLVVSARAKR VNIISPKFTV SEKVDVAQDI
NMKITFKGLE DG