Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4957 |
Symbol | |
ID | 5602415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009829 |
Strand | - |
Start bp | 44291 |
End bp | 45409 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640930820 |
Product | baseplate J family protein |
Protein accession | YP_001471725 |
Protein GI | 157362866 |
COG category | [R] General function prediction only |
COG ID | [COG3948] Phage-related baseplate assembly protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 0.466467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.870865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCCGC GTGGTAATTT GCCTGAAATT AATTTCGCCG AAAAATCCCC TGAAATCACC GTCAATGAAG CGATCACTGT TTTCGAAAAG TTGAGCGGAG AAACATTGGC ACCTGCAGAC CCCCGCAGGG TATTCATTGA ATCGCTTTGT TATATCATTG CCCAACAACG CGTCATTATT GATCACTCAG CAAAAATGAA CTTGCTTAGC TACTCCGAAG GGAAATATCT GGATGTGCTG GGGTATTTTC TGGATGTGAC GCGATTACCT GCCCAATCGT CCGTAACAAC ACAGCAATTT GAGTTGGAAA CCGCACAAAT CAGTGCCTAT GTCATACCTG TAGGCGCACA GGTTACGACG GGTTCAAGGG TGTTTGAGAC CACTGAAGTC TTGGAGATAC CTATAGGCGC ACTGACCGGC GTTGTTCCCG TCAGAGCCGT TGATGCAGGC GCGGGTGGAA ATGGCTTGTT GCCAGGCCAG ATTAATACAC TGATCACGCC GTTGCCCTAC ATCAAAAATG TAACGAACCT GACAACAACC AGTGGCGGCG CAGACGTTGA GAATGATGAT AATTTTGCTG AACGGATACA CTTAGCCCCT GCGTCGTTCT CGGTGGCTGG CCCCGAGGAT GCCTACAAAT ATTGGACGCG CACAGCGAAT CAGGGCATTA AAGCTGTTTC GGTAAATTCT CCGACACCCG GCGTGGTAGA TGTCAGGTTT TTAATGGCTG GTGGTATTTT CCCTAGTCAG GAAGTCATGG ATGAAGTGAA TAGCGTCTTG AATGCGAAAA CTATTCGCCC GTTGACAGAT AAAGTTAATA TATTACTGCC TAATAATATT GATTATGAAA TAGACATTGA ATACTGGATA TCCAATGAAA ATAAAACGCA AGCAGATTTA ATTCAGAAGG ATGTTAAAAA GGCCGTTGAG AATTACGCTC TTTGGCAGCG CTCTGAATTT GGCCGAGACA TTAACCCTGA TATGTTAAAT AACTTGGTTG TTTCCGCTAG AGCTAAACGC GTCAATATAA TAAGCCCGAA ATTCACCGTT TCAGAAAAAG TCGACGTGGC GCAAGATATT AATATGAAAA TCACATTTAA GGGGCTGGAG GATGGTTGA
|
Protein sequence | MIPRGNLPEI NFAEKSPEIT VNEAITVFEK LSGETLAPAD PRRVFIESLC YIIAQQRVII DHSAKMNLLS YSEGKYLDVL GYFLDVTRLP AQSSVTTQQF ELETAQISAY VIPVGAQVTT GSRVFETTEV LEIPIGALTG VVPVRAVDAG AGGNGLLPGQ INTLITPLPY IKNVTNLTTT SGGADVENDD NFAERIHLAP ASFSVAGPED AYKYWTRTAN QGIKAVSVNS PTPGVVDVRF LMAGGIFPSQ EVMDEVNSVL NAKTIRPLTD KVNILLPNNI DYEIDIEYWI SNENKTQADL IQKDVKKAVE NYALWQRSEF GRDINPDMLN NLVVSARAKR VNIISPKFTV SEKVDVAQDI NMKITFKGLE DG
|
| |