Gene Spro_4922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4922 
Symbol 
ID5602451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009829 
Strand
Start bp12199 
End bp14049 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content51% 
IMG OID640930785 
Productterminase GpA 
Protein accessionYP_001471690 
Protein GI157362831 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0380287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACAA CCGTTTGGAG TGAGTCTTTT TTCCGCTCGC TGCGGCCGCG TTCCCGGTTA 
ACAGTTTCCG CCTGGGCGGA TAAATACCGC GAGGTAGCCC CCGGAACGTC GCCAGAACCG
GGTAAGTGGC GTACATCGCG GGTGCCGTAT TTGCGGGAAC CGATGGATAT CATCGGTGAT
GCTGAAACGG AAACCGTCGT TTTAATGTTC AGTTCGCAAG TGGCAAAGTC AGAACTGCAG
CTGAATGTCA TGGGGTACTT CACCGACCAA GAACCCTCCC CGCAGCTTAT GGTTTATCCC
ACGATTGACG CGGCGGAAGC ATTTTCAAAA GAGCGTATCG ACCCGACCTT TAAATACTCG
CCCGGGCTAA AAAACAAACT CAGCGAAGGC CGCGAGGGAC GCGGTATTGC AAAAAAGACC
AGTACCACTA TCCGCATGAA ACACTATGCC GGTGGTTATA TCGCGCTGGT GGGAGCCAAT
GCGCCAGCCG GTCTGGCATC GCGTCCGATT CGTGTACTGC TCGCTGACGA AATCGACCGC
TATACAGCGA CGGTGGAAGG GGATCCCCTG AAGCTGGCCA TTCAGCGTAC AACCAACTTT
CACAACCGGA AAATCGTTCT TGCTTCAACG CCGGTGAAGA AAGAGACGAG CAAAATTTTC
GAGTGGTTCA AAAAGTCCGA TCAGCGTCGG TATTACATTC CATGTCCGCA TTGTGGTTGC
CTTCAGGTGC TCCGCTGGTC ACAGGTCAAA TGGGAAAAGA ACGATCTCGG TGAGGCATTG
CCCGAAACCG CCCGCTATGA GTGCAAAGAA TGCGCCGGTC ACATATTGGG TTCAGGTAAA
CCCGACCCCG AACTGATAGC CAAAGGGGTT TGGAAAGCCG ATAAACCGCA CGTGAAAAAA
ATTGTCGGTT TTCACATCAA CAGCCTGTAT TCGCCGTGGG TAGCGCTATC TAGCCTTGTC
GAAGAGTTTG CCGCAGCAAC AAAAAACCGA GACAAAACCG GCTTAATGGA GTTCATCAAC
CTGAAGCTGG GCGAGCCTTG GGAAGAAGAT AAAAAAGGCG ATATTGATCA CGATTATCTT
TTGCGTCGTC GCGAACGGTA CGCCGCTGAT TTGCCGATTG GTGTGTTGGT TCTAACTGCA
GGCGTAGATA CGCAGGATAA ATATCTGGTG GTTGAAGTAA CCGGCTGGGG AAAAGGGAAA
GAAAGCTGGG GCATTGAGTA CAAAATTTTC ATGGGTGATA CAAAACAACC GCAGGTGTGG
AAAGAGCTTG ACGAGTATTT GCAGCGCAGT TGGTCATTTG AGGACGGTCG TCGCCTCTCG
ATCGCCGCAA CATGCGTCGA CTCCGGTGGT CATGCCACAA CCGAGGTTTA TCAGTTTACT
AAACCACGTG AATCACGACG CATTTTCTCC ATTCGTGGGC GCGGTGGTGT CGGGATCCCG
TTCATTGGAA AGCCAAATAA CAATAACCGC GTTGGTGCGA TGTTATTCAA CCTCGGCGTT
GATGATGGTA AAGGCACAAT CATGTCGCGC ATTAAACTGC ACGATGAAGG GCCAGGGTAT
ATGCATTACC CGCTCGGTGA TAAAGGCTTT GATACTGAAT ATTTTAAAGG ATTGTTATCA
GAGCGAAAAA TATACAAATA CGCTAAAGGC AAGACCCAAG AGGTATGGGA AAAAGTCTAC
GAACGAAATG AACCGCTCGA CTGCCGCAAC TACAGCACCG CCGCACTAGA AATCCTCAAT
CCCAATTTCG AATGGCTGGA ACAGCAAGTT CAGCTCGGCA ACGTTTATAT ACAACACCCG
CAAGCACAGC GTCCTAAAGG TCGCCGCGTG ATGAGTAAGG GTGTGGGGTA A
 
Protein sequence
MGTTVWSESF FRSLRPRSRL TVSAWADKYR EVAPGTSPEP GKWRTSRVPY LREPMDIIGD 
AETETVVLMF SSQVAKSELQ LNVMGYFTDQ EPSPQLMVYP TIDAAEAFSK ERIDPTFKYS
PGLKNKLSEG REGRGIAKKT STTIRMKHYA GGYIALVGAN APAGLASRPI RVLLADEIDR
YTATVEGDPL KLAIQRTTNF HNRKIVLAST PVKKETSKIF EWFKKSDQRR YYIPCPHCGC
LQVLRWSQVK WEKNDLGEAL PETARYECKE CAGHILGSGK PDPELIAKGV WKADKPHVKK
IVGFHINSLY SPWVALSSLV EEFAAATKNR DKTGLMEFIN LKLGEPWEED KKGDIDHDYL
LRRRERYAAD LPIGVLVLTA GVDTQDKYLV VEVTGWGKGK ESWGIEYKIF MGDTKQPQVW
KELDEYLQRS WSFEDGRRLS IAATCVDSGG HATTEVYQFT KPRESRRIFS IRGRGGVGIP
FIGKPNNNNR VGAMLFNLGV DDGKGTIMSR IKLHDEGPGY MHYPLGDKGF DTEYFKGLLS
ERKIYKYAKG KTQEVWEKVY ERNEPLDCRN YSTAALEILN PNFEWLEQQV QLGNVYIQHP
QAQRPKGRRV MSKGVG