| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4645 |
|---|
| Symbol | |
|---|
| ID | 5601072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009806 |
|---|
| Strand | + |
|---|
| Start bp | 142312 |
|---|
| End bp | 143358 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640930720 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_001468228 |
|---|
| Protein GI | 157283960 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC AGACCTTCCT GCTGGTCACC CTCGCCGGTC TCGTCTTCGG GTTGGGTGTC
GTCCTGCTCG TGCTGGCCCT GCGCGGTCAG GGCGCCGGCG TTCGCCCACC GCGGGCCTTG
CAGCTGGGTC ATTGGCCGCG CGAGACCAGG ATCCGCTGGG GCGTGGCGGT GGCCGGGGGG
CTGCTGACCC TGCTGATCAC CCGGTGGATC ACCGTGGCGC TGGCCATCGC CGTGATCGCG
GTGATGTGGC CGCGTCTGTT CGGCGGCGCG CGCAGTCAGG CTCGCCAGAT CCGCAAGCTG
GAGGCGCTGG CCAGTTGGGT GGAGTCGTTG CGCGACACCA TCAGCACCGG GCAGGCACTG
CCGGAGGCCC TGCCGGCCAG CGCACTGACC GCGGCCCCTG AGATCGCCGA GCCGCTGGCG
AACCTGTTGG ACCGCATGCG CGCGCGCCAG TCCCTGGACC AGGCGCTGCT GCTGCTGGCC
GATGACCTCG ACGATCCTGA GGCGGACAGC GTCATCGGCG CGTTGGCCAT GAACGCACGG
GTGCAGGGCA AGCGGCTCAA CGTGGTGCTG ACGTCGCTGG CGGAGTCGGC GCGCAAGCAG
CTGACCATCC GCCGTGAGAT CGAGGCCGGG CGGGCGAGCA TGCGCCGCGG GGTGACGTTC
GTGATCATCA CCACCTGCAC GCTGGTCATC GGCATGACGG TCTTCAACCG CGACTACGTC
GAGCCGTACT CCACCGTCAC CGGTCAGATC GTCTTGGCCA TCGTCATCGG GCTGTTCACC
GCCGGCTTGT TCTGGCTGCG GCGCCTAGCC GACTTCGAGA CCCGGCGCCG GTTCCTGGTG
ACACCCCAGA CCACCTCGCA GGCGGCGGCT CAGTCCCTCC AGCCCGTCCC GTCGGCTCAG
TCCGGGGAGC GAGCTGACGT GCGGGGCGCA GGCGAGGTCG ACGTGGCCTC GTCCTTGGAC
CTGCCTTCGG CGCCGACGCT GGCTCCCGCC GGGGTCACCT CTGCCCCGAC CTCCGCCTCG
ACCTCTGCCT CCGGAGGGAC CCGATGA
|
|---|
| Protein sequence | MIDQTFLLVT LAGLVFGLGV VLLVLALRGQ GAGVRPPRAL QLGHWPRETR IRWGVAVAGG
LLTLLITRWI TVALAIAVIA VMWPRLFGGA RSQARQIRKL EALASWVESL RDTISTGQAL
PEALPASALT AAPEIAEPLA NLLDRMRARQ SLDQALLLLA DDLDDPEADS VIGALAMNAR
VQGKRLNVVL TSLAESARKQ LTIRREIEAG RASMRRGVTF VIITTCTLVI GMTVFNRDYV
EPYSTVTGQI VLAIVIGLFT AGLFWLRRLA DFETRRRFLV TPQTTSQAAA QSLQPVPSAQ
SGERADVRGA GEVDVASSLD LPSAPTLAPA GVTSAPTSAS TSASGGTR
|
|---|
| |