| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2175 |
|---|
| Symbol | |
|---|
| ID | 5597595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1693648 |
|---|
| End bp | 1694193 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640930236 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_001467512 |
|---|
| Protein GI | 157164232 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4648] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.642064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCATA AAATAGTAAA AGTAGCGCTA GTTTTAGCAA GCATCGCCTA CCCTTTGGTG
CTATTTTTTT GGCAAAAGGG TGCAACATTT ATCTTTTGCG CTCTTTGCGC TCTTTGGCTG
GCTAGGGCTT ATTTTGAAAG CGCTAAAACA AGGCAGGTTT GCTTAGTGGC TGGGCTATTT
TTTGCCATTT GCGCTATTTT TAGAAGCGTG AATTTAGCGC TTTTATACCC AAGTATCGTA
AGTCTTGGCT TTTTGGCGGT ATTTTTTTAT AGTTTAAAGG GCGAGGCGGT CATAACAAAG
CTTGCTAGGC TAAAAGAGAA AAGCATAGAC GAAAAAGTCG TTAGCTACAC AAGAGGGCTA
ACTAAAATTT GGTGCTGGTT TTTCGTTTTT AACGCAGCTT TTGCCTTTGT TTTGGCGCAG
TTTGAGGATA AAATTTACTG GAGCATTTAC TGCTCATTTG TATCTTATAT CTTGATGGGA
GTTTTGTTTT TTGGCGAAAT TTTATATCGT AAAATTTTTA TTTTAAAGAG GGAAAATGGA
TTTTAA
|
|---|
| Protein sequence | MKHKIVKVAL VLASIAYPLV LFFWQKGATF IFCALCALWL ARAYFESAKT RQVCLVAGLF
FAICAIFRSV NLALLYPSIV SLGFLAVFFY SLKGEAVITK LARLKEKSID EKVVSYTRGL
TKIWCWFFVF NAAFAFVLAQ FEDKIYWSIY CSFVSYILMG VLFFGEILYR KIFILKRENG
F
|
|---|
| |