Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_2073 |
Symbol | |
ID | 5597366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1256347 |
End bp | 1257198 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640929819 |
Product | 1-aminocyclopropane-1-carboxylate deaminase |
Protein accession | YP_001467101 |
Protein GI | 157163856 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.015476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTGATA AAATTCGCTT AAGAGAGCGA GAATTTTGGC TTTTAAGAGA TGATTTGCTA GGCGAGTTTA ACGGCAACAA AGCAAGAAAG CTAGAGTATT TTCTCAAGGC TGATCTTAGC GGCGTCAAAG CCATCGTATC TCACGGCTCA AGCCAGTCAA ATGCGATGTA TAGCCTAAGC CTTTTTGCCA AGCTAAAAGG GCTTAAATTC TACTACGTAG TCTCTCATTT AAGCTCAAAT TTAGAGCAAG ATCCAGTTGG AAATTTCAAA TTTGCACTTG AAAATGGTAT GGAAATTTTT GTAAAAGAGG AGCGTGAGAA ATTTGCTAAA GAGCTAGCAA AGAGTAAAAA CGCGCTATTT ATAAACGAGG GCGTAGCGCA AAGCGAGGCT GAGCTTGGCT TTATAACGCA GGCAAATGAG ATCAATGAGT GGAGCAAAAA AAGTGGCATA AGGCCTGATA TTTTCTTGCC CTCAGGCACT GGCACAAGCG CATGCTACCT AGCAAAGCAC ACCGATCTTA GGGTCTTTAC AGCACCTTGC GTAGGGGATA GCGACTATCT AAAAAAGCAA ATTTACGAGC TAGATAAAAA CAGCAAAGTG CAAATTTTAA ACCCCCCAAA GAAGTATCAT TTTGGAAATT TATACAAAGA GCTTTATGAA ATTTGGCTTG AGGTTTGTAA AAGTGGCGTA GAATTTGAGC TTATCTACGA CCCAGTGGGC TTTATGACGC TTTTTGCAAA TTTAGATAAG CTTGAGAGCG AAATTTTATA TATCCACCAG GGCGGAATTT TAGGTAACAT TACACAAAAA CAAAGATATG AGAGAAAACT AAAAATAAAG GATCATAAAT GA
|
Protein sequence | MIDKIRLRER EFWLLRDDLL GEFNGNKARK LEYFLKADLS GVKAIVSHGS SQSNAMYSLS LFAKLKGLKF YYVVSHLSSN LEQDPVGNFK FALENGMEIF VKEEREKFAK ELAKSKNALF INEGVAQSEA ELGFITQANE INEWSKKSGI RPDIFLPSGT GTSACYLAKH TDLRVFTAPC VGDSDYLKKQ IYELDKNSKV QILNPPKKYH FGNLYKELYE IWLEVCKSGV EFELIYDPVG FMTLFANLDK LESEILYIHQ GGILGNITQK QRYERKLKIK DHK
|
| |