| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2031 |
|---|
| Symbol | |
|---|
| ID | 5595992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1290947 |
|---|
| End bp | 1292704 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640929856 |
|---|
| Product | putative Myb2 protein |
|---|
| Protein accession | YP_001467138 |
|---|
| Protein GI | 157164301 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.370562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGGCT CAAACCCAGA AAATGGTCAC CCAATCGCAG CTATGCACAT CCAAAGAGCG
CTAAACCGCG GTGCAAAACT GATCGTTATC GACCCTATAA AGACTGAGTT TGCAAGTAGA
GCAGACATCC ACTTGCAGCT AGAGCCTGAG CACAACATCC CAGTTATCAA CGCACTTCTT
TACACTATCA TCGAAGAAGG CCTTGTAAAT GAGGAATTTG TAAGAGATCA CACAATAGGC
ATCGAGTACG TTAAAGAAGC TGTAAAAGAC TATGCCCCAG AGGTTGTAGC TAAATACACA
AGGCTAAATC CAGAGGATAT CAGAGCAGCT GCTAGAATGT ATGCTACAAC AAAACCAGCC
GTCATCACTC ACGGTATGGG CGTAACTCAC TTCAACCACG GCGTTGGCGG AGTTTGCGAT
GTATCAAATT TATTCTTGAT CACTGGAAAC ATCTGCGAGC TTGGCACAGG CGACTTGCCA
CTTAGAGGTC AAGAGAACGT TCAAGGCTGC TGCGACATGG GCGTTTTACC AAATATCTTC
CCAAATCTTG GCTCAGTAAC CGATCCAGAG CAAAGAGCTT GGTTTGAGAA AATGTGGCAC
CTAGAACCTG GATTTTTAAA CTCAAAGATA GGTATCCATA AAACTGAAGT ACCTGATGCG
ATCCTTGATG GCAGAGTGCA TTTCTTCTGG ACTATCGGCG AAAACCCAGT CATCTCTGAG
CCAAATACAA ACCACTTCTT AAAAGGCATT GCAAATGTCG ATTTCTACGT GGTTCAAGAT
CTATTTTTAA CTGAGACTTC ACTAAAAGCT GACGTCGTTC TCCCTGGCGT TGCAAGTAGT
GAAAAAGAGG GTCTTTACAC AAACGCAGAG CGCCGTGTCC AGCACAACGA AGCAGTCATC
ACACCTCCAG GTGATGCTAG ACAAGATTGG TGGATCGTTT GCGAGATCGC ACGTCGTTTG
GGCGCAACTG AGGGCTTTAA CTTTAACTCT CCAGAAGAGA TTTGGGAAGA AGTTAGAAAA
TGTGACCCTA GACGCTACGG CGGCATGAGC TACTATAGAC TTAAAAAATA TCACGGACTT
CACTGGCCAT GCCCAACTGA AGATGATATG GGTGGTCAAA GCCTCTATCT TGATAAGAAA
TTCTTTACCC CTGATGGCAA AGGTCGCTTT GTGCCATGCC TATTTGTGGA TAAAGCTGAT
GAGATCGAGA GCGCAAAACT TGAGTTTGCT AAGAAGATGA ATATGTCGCC TGAGTATCCT
ATCATGGCTG GTTCAGTCGA TGAGAAGACT GACGCTGAGT ATCCGATACA GCTTTTAACT
ACAAGAAAAG TTTATCAATA CACAGTTGGC ACCATGACAA GACGCTCACG TGCTATCGAA
GAAGGTGGCG ACAGCATCGG ACCTATCGCT GAGATGAGCC CAGCGCTTGC AGAAAGATAT
GGGCTAAAAC AAGGCGACTT TATCAAAGCT TGGAGTAGAT ACGGCTACAT CGTCGTAAAA
GCTGAAGTAA CTGACATCGT GCCTGATGGC ATCATCCAGA TGACTTTCCA CTACTGGGAG
AGCTCTTGCA ACGAGCTAAC AAGCAGCGGT TGGGACTACA TCAGTAAGAC TCCGACATTT
AAAGCAGCTA TCCAGATCAA AAAGATCGAT GAAGAGGAAT TTTTACGAGT TCGCGAGCTA
AAACGCGAGA AATTCCAAAC TTCAAAGATC ATCTACGATG ACTTCCACCA CCACGGAAAC
GCAGCGATAA ATGAGTAA
|
|---|
| Protein sequence | MIGSNPENGH PIAAMHIQRA LNRGAKLIVI DPIKTEFASR ADIHLQLEPE HNIPVINALL
YTIIEEGLVN EEFVRDHTIG IEYVKEAVKD YAPEVVAKYT RLNPEDIRAA ARMYATTKPA
VITHGMGVTH FNHGVGGVCD VSNLFLITGN ICELGTGDLP LRGQENVQGC CDMGVLPNIF
PNLGSVTDPE QRAWFEKMWH LEPGFLNSKI GIHKTEVPDA ILDGRVHFFW TIGENPVISE
PNTNHFLKGI ANVDFYVVQD LFLTETSLKA DVVLPGVASS EKEGLYTNAE RRVQHNEAVI
TPPGDARQDW WIVCEIARRL GATEGFNFNS PEEIWEEVRK CDPRRYGGMS YYRLKKYHGL
HWPCPTEDDM GGQSLYLDKK FFTPDGKGRF VPCLFVDKAD EIESAKLEFA KKMNMSPEYP
IMAGSVDEKT DAEYPIQLLT TRKVYQYTVG TMTRRSRAIE EGGDSIGPIA EMSPALAERY
GLKQGDFIKA WSRYGYIVVK AEVTDIVPDG IIQMTFHYWE SSCNELTSSG WDYISKTPTF
KAAIQIKKID EEEFLRVREL KREKFQTSKI IYDDFHHHGN AAINE
|
|---|
| |