| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2024 |
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| Symbol | rrmJ |
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| ID | 5597067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1297888 |
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| End bp | 1298601 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640929863 |
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| Product | ribosomal RNA large subunit methyltransferase J |
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| Protein accession | YP_001467145 |
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| Protein GI | 157164345 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1189] Predicted rRNA methylase |
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| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0155981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGTTTG ATAACTATGT CGCAAGCGTT TTAAACATAA GCAGAAACAA GGCGAGCGAG
CTGATAAAGG GCGGCAAGGT GCTAATAAAC GGCGAAATTT GCACCAAGGT TTCAAGCGAG
GTTAGCGAGG CTAAAATTTC ACTGCTTGAT GAAATTTACG TTGGGCGAGG CGCACTTAAA
CTAAAGAGCT TTTTGGAAGC GATGAAATTT GACCTAGCTG GCAAAAACGC ACTTGATATC
GGCAGCTCAA CTGGTGGCTT TATGCAAATT TTACTTGAGC GTGGCGTAAA GAGCGTGACT
GGCGTTGATG TGGGCACTGA TCAGCTAGAC GCCAGCCTAA GAAGTGATGA GCGAGTGAAA
ATTTATGAAA AGACTGACGT CAGGGAGTTT GCTAAAACGC ATCAAAATAA ATTTGATCTA
ATAACCTGCG ACGTTAGCTT TATCTCTTTG GCTGAAATTT TACCAGCCAT TTGCGAGCTT
GCAAGCGAGA ATTCGCTCAT TATAACGCTT TTTAAACCGC AGTTTGAAGT GGGCGTTGGC
ATAAAACGCA ACAAAAAAGG CGTTGTCACC GACGCTAAGG CTGTAAATTT AGCGATGAAG
CGCTTTGAAG TGCTAGCAAG TAGCTTGAAA TTTGAACTGA TAGCTTGCAA AGAGTGCGAG
GTCAAGGGGA AGGAAGGAAA TGCCGAATTT TTCTACGCTT TTAACAAAAG ATAA
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| Protein sequence | MRFDNYVASV LNISRNKASE LIKGGKVLIN GEICTKVSSE VSEAKISLLD EIYVGRGALK
LKSFLEAMKF DLAGKNALDI GSSTGGFMQI LLERGVKSVT GVDVGTDQLD ASLRSDERVK
IYEKTDVREF AKTHQNKFDL ITCDVSFISL AEILPAICEL ASENSLIITL FKPQFEVGVG
IKRNKKGVVT DAKAVNLAMK RFEVLASSLK FELIACKECE VKGKEGNAEF FYAFNKR
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