| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2000 |
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| Symbol | |
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| ID | 5595760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1318244 |
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| End bp | 1320163 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640929880 |
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| Product | hypothetical protein |
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| Protein accession | YP_001467162 |
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| Protein GI | 157164705 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGAAT TTTTAACATC ACTTCTCGTT GGCATCAAAG AAAAAGAGAT ATCAAACGAA
GATAAAGAGA TCTTGCGTAA TCTCCTAAAC CTTGGTGCCG TAAGCTTACA TAAAGATAAA
TTTTACCTAA ACAACGGCTA TGTCTGCGGC AAGCTAGACA TCAGCCAAAA CGCAACTGGC
TTTATCATGC CATTTGACAA GCGCTTCAAG CAAGATATCA TCGTAGAAAA TAAAAATTTA
AACAACTCTC ACCTTGGCGA TATCGTGCTA GCAAAGCTTT TGCCACTTAA GAAAAAACGC
CAAAGTGCTA AGATAGTGAT GAGCCTAAAG CTTGCAAATG AGACAAGCGT GGTCTATACA
AAACGCTTTG GAGCGGCCAT TTTAGGGGTA AATTTAAAAA CTGGGCTAAG CACAACCCTA
AAGGCAACTC AAAAAAGCCT AAAGATGCTC CCGCTTGGGA CGCTACTAAA GATAAACAAC
CTAAACAACG AAATAGTTGA GGTTTTAGGA AATTTAGAAG ATCCGCTAAG CGATGAGAAA
ATTTCGCTTG CTATTTATAA TAAAAATGAT AAATTTAGCG AGGCTTGCGA GCTTGAAGCA
AAGGCATTTG GCGATGAAGT CGATGCTAGC ATGTATCCAA ACAGGGTTGA CCTAAGAAAT
TTAGAGTTTT GCACGATCGA TCCAGTCGAT GCCAAAGACT TTGACGATGC CATATATTTT
GATGAAAAAA AGCGCGAAAT TTACGTCGCA ATCGCCGATG TAAGCGAGTA TGTGACCGCG
TATAGCGCCA TTGATAGCGA GGCTAAAAAA AGAGGCTTTT CTATCTACTT TCCGCACATT
TCAGTGCCGA TGTTGCCGCG CGCGCTTAGT GAAAATATCT GCTCGCTAAA GCCAGACGTG
CCGCGCCTTG CATTTTGTTT TAAAATTTCA CTCGATGCAA ATAACGAGGT AAAAAAAGAG
GAGCTTTTTG AGGCGATCAT CCTTTCAAAA AGGCGCTTTA ACTACGATGA GATCGATGAA
ATTTTAGAGG GCAAAAGAGA GTGTGAAATT TCATGGATCA AGCCACTTTT TAAACTCACC
ACGAAGCTTC GCAAAAAAAG GCTTTTGCAC GCATTTGACT TTAGGACAAA AGAGCTTAGA
ATGAGCCTTG ATGAAGAGGG TCAAATTTCG CAAACTAGGT TTGAAAGCGA CTCCGACTCG
CACAGACTTG TTGAGGACTG CATGCTTTTA GCAAACAAAG CCGCAGCAAA GCTCATCACA
AAGGGCGTTT TTAGAAACCA CGCTTCGCCT GATTTTAAAA AGATAGATAC CTTGCTTGAG
GACTTGCAGC TTTTGGGGCT TGACTTTACC TACGAGAGCG ACCTTGCAAA TTTGATAAGA
AAGATCCAAA CAAAGGCTGA TGAACTAGGC AACCGTGAAG AGATAGATAA GCTCATCATC
AAGTCTCAAA AAAAGGCTGA ATACTCAAGT GAAAATTTAG GCCACTTTGG GCTTGGATTT
GATAGATACA CGCACTTTAC AAGCCCTATT AGACGCTATT CTGACCTTAT CTTACACAGA
CTTTTAAAGG CTAAAATTTC AAAAGATGAG AAGCTTTACA ACTTCTTGCT TTTAAACATC
CAAAGCACAT GTGCAACCTT AAGCGAGCTT GAAAGAGAGG CCGACAAGGT AGCTTACGAC
TTTATGGATA GGAAATTTGC GCGCTGGGCA GCTGCAAACA TCGGCAAAGA GGTGCGTTGC
TACGTGAGCG AAAACCAAAA TGTCTTGGTC GCTAAGCTTG ATGATTATTT TGTTGGAGCT
AGGATTTTCA TCACTGGATA CAGCGCAAAT TTACTTCAAA AGCTTGTTGT AAAGATCACA
GAGGCTGATA TCGCGAGTGC TAAAATTTTT GCAAAAGTGG TAAGAAAGAT CGATGTATAG
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| Protein sequence | MKEFLTSLLV GIKEKEISNE DKEILRNLLN LGAVSLHKDK FYLNNGYVCG KLDISQNATG
FIMPFDKRFK QDIIVENKNL NNSHLGDIVL AKLLPLKKKR QSAKIVMSLK LANETSVVYT
KRFGAAILGV NLKTGLSTTL KATQKSLKML PLGTLLKINN LNNEIVEVLG NLEDPLSDEK
ISLAIYNKND KFSEACELEA KAFGDEVDAS MYPNRVDLRN LEFCTIDPVD AKDFDDAIYF
DEKKREIYVA IADVSEYVTA YSAIDSEAKK RGFSIYFPHI SVPMLPRALS ENICSLKPDV
PRLAFCFKIS LDANNEVKKE ELFEAIILSK RRFNYDEIDE ILEGKRECEI SWIKPLFKLT
TKLRKKRLLH AFDFRTKELR MSLDEEGQIS QTRFESDSDS HRLVEDCMLL ANKAAAKLIT
KGVFRNHASP DFKKIDTLLE DLQLLGLDFT YESDLANLIR KIQTKADELG NREEIDKLII
KSQKKAEYSS ENLGHFGLGF DRYTHFTSPI RRYSDLILHR LLKAKISKDE KLYNFLLLNI
QSTCATLSEL EREADKVAYD FMDRKFARWA AANIGKEVRC YVSENQNVLV AKLDDYFVGA
RIFITGYSAN LLQKLVVKIT EADIASAKIF AKVVRKIDV
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