Gene CCC13826_1995 details

Gene Information

• Locus tag: CCC13826_1995
• Symbol: mrdA
• ID: 5595988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: -
• Start bp: 1322694
• End bp: 1324517
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640929885
• Product: penicillin-binding protein 2
• Protein accession: YP_001467167
• Protein GI: 157164806
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGATGC GTATCGTTTT TGGCGTGATC GCTCTTTTTT GGATCATGCT TTTGGGGCGG 
ATTTACCACC TAAGCGTAAA TTCAAATACT TACTACAACG AGATCGCCGA GCAAAATGCG 
ATAAAAACTA TCTACATCCC GCCAGTTAGA GGCATCATCT TTGATTCGCA CGACAAGCCT 
ATGGCGGTCA ATCGCCTTGG CTTTTCTATC TATGTAAGGC CGCACCTTAG CGCAAACAAA 
AAGGTGAAAA TTTTAGACGA TGAGCTAGCC TATATCGGCT CGCTATTTGG CGATCTAAAC 
GTCACCAAGC TTAAAAATGA ATACATAAAA AACGACTCAG CTTACAACCA AGACTTTATA 
AACGTGGTCG AATTTGTTGA TTATGATAAA TTTTTGCCAT TTTTTGCACC TCTTTCTCTG 
CGTGAAAATT TAGAGATAAG ACCCGCATCA AAACGCCACT ATCCATACAA TGACCTAGCT 
TCTCACATCA TCGGCTACGT TGGCAGGGCA AACCAAAAAG ATATGGAAAA TGACCCCTTG 
ACAAAGCTTA CAAACTATAT TGGCAGAAGC GGAGTAGAGC GCTTTTATAA CCCTATCTTG 
CAAGGAATTC AAGGCTTTAA AAAGATCAAG GTAAATGCAC TAAATGAAGA GATCGAGCAG 
GTGAGCTATC AAGCGCCACA AAGTCAAAAC ATAAAGCTCG CCGTCGATCT TGAGCTTCAG 
CAGTTTGTCG CTGACGTCTT TGGTAAGGAT GCAGGAAGTG TCATAGTTAT GAGCTTAAAA 
GATGGCGCCA TCATCGCAGC CGGAAGCTTT CCTGAGTATG ATCTAAATCC TTTTGTGCTT 
GGAATTTCTC AGGCTGAGTG GGAAGAGCTT GTAAAAAACG TCGATCACCC ATTTACAAAT 
AAGTTGATAA ACGGCCTCTA TCCGCCAGGA TCTGTCGTAA AAATGGGTAT GGCGCTTGCC 
TTTTTGGACA ATGGCATGAG TAAATATGAT AGCTTTTTTT GTAGTGGATC GTATGAGCTT 
GGAGGGCGTA AATTTCGCTG CTGGAACTCG CATGGTCATG GCAGTGTTAA TATGAACACA 
GCCATTAGAG AGAGCTGCGA TGACTATTTT TACAAGGGTA GTCAAAAGAT CGGTATAGAC 
GCCATTGTGC CGATACTTGA GCGTATGGGC TTTGGTAGAA AAACAGAGGT TGATTTGCCA 
AATGAATTTG TAGGGACCTT GCCAAGCAGG GAGTGGAAGA TGAGGAAGTA TGGCAAGGCG 
TGGTTTCAAG GTGAGACGCT CATCACCTCT ATCGGACAGG GAAATTTTCT AGTCACGCCT 
ATGCAGGTGG CTAAATACAC AGCAGGCCTT GCAACTGGGC TAAATGTAAC GCCACATTTT 
TTAAAGAGCA TAGATGGCAA GGATGTTGAT TTTACGCCAA CAGATGATGC TTTTACGCCG 
TTTGAAAAGT CGCAGCTACC TGCCATTAGG CATGCGATGT ATGAGGTGGC AAATCACCCA 
AGAGGTACGG CAAATAGGCA CTTTGTGGGA AGTCTTGTAA AGGTTGCGGC AAAGACTGGA 
ACAGCTCAGG TCGTTGGCAT CTCACAAACT GAAAAGAAGC GTATGAAAGA GGAGGATATG 
GCGTATCTGC AAAGATCTCA CGCGTGGATG ACGACCTATG CGCCTTTTGA GGATCCACAA 
TTCGTCATCA CGATGGTTGT CGAGCACGGC GGTCACGGCG GTAGCGCTGC TGGACCAAAA 
ATCTCTCAAA TTTATAACAA GCTAGTTGAA ATGGGATATA TAAAGCTAGA TAAAGTCCAG 
ACTGAGAAAG ATAAAAAACA ATAA 

 

Protein sequence

MRMRIVFGVI ALFWIMLLGR IYHLSVNSNT YYNEIAEQNA IKTIYIPPVR GIIFDSHDKP 
MAVNRLGFSI YVRPHLSANK KVKILDDELA YIGSLFGDLN VTKLKNEYIK NDSAYNQDFI 
NVVEFVDYDK FLPFFAPLSL RENLEIRPAS KRHYPYNDLA SHIIGYVGRA NQKDMENDPL 
TKLTNYIGRS GVERFYNPIL QGIQGFKKIK VNALNEEIEQ VSYQAPQSQN IKLAVDLELQ 
QFVADVFGKD AGSVIVMSLK DGAIIAAGSF PEYDLNPFVL GISQAEWEEL VKNVDHPFTN 
KLINGLYPPG SVVKMGMALA FLDNGMSKYD SFFCSGSYEL GGRKFRCWNS HGHGSVNMNT 
AIRESCDDYF YKGSQKIGID AIVPILERMG FGRKTEVDLP NEFVGTLPSR EWKMRKYGKA 
WFQGETLITS IGQGNFLVTP MQVAKYTAGL ATGLNVTPHF LKSIDGKDVD FTPTDDAFTP 
FEKSQLPAIR HAMYEVANHP RGTANRHFVG SLVKVAAKTG TAQVVGISQT EKKRMKEEDM 
AYLQRSHAWM TTYAPFEDPQ FVITMVVEHG GHGGSAAGPK ISQIYNKLVE MGYIKLDKVQ 
TEKDKKQ