Gene CCC13826_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_1959 
Symbol 
ID5596248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand+ 
Start bp1356241 
End bp1356888 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content39% 
IMG OID640929920 
ProducttRNA (guanine-N(1)-)-methyltransferase 
Protein accessionYP_001467200 
Protein GI157164633 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TTTCTAAATT TCTAGCAGTC GTAGCTCTTT TAGGGCTTTT TAGTGGTTGT 
GCTGAAAAAT ACACTGAACT TTACAATCTA ACTCCAGATG AATGGTACGC TCAGGTCATC 
GCTGACATAA AAGATGGCGA TCTGGAGTCA GCTGATAAAC ACTACGTTTC AATGGCTAGC 
GAGCACGTTG CAAGCCCACT TTTGGAGCAA ATTTTACTCA TCCTTGCCCA AGCTCACGCA 
AATGACGAAG AGTATCTCAT GGCAAATCAC TATCTTGACG AGTACATCAA AAGATACGGC 
GATAACGGCC CAAAAACAGA ATTTGCCCAG TATCTAAAGA TAAAAGCAAA TTTTGACTCA 
TTTACCCAGC CAAACCGCAA CCAAAAACTA ATGGAGGATA GCGTAACTGA GATCGAAAAA 
TTTCTTTATA TGTATCCAAA TACCGAGTAT AAGCCGCTTA TCGAGACCAT GCTTATCAAA 
TTTAAACTTG CTCTTTACTT CTTAGATATG CAAATAGCAG ATCTTTACAA GAGAACTGGC 
CGTGATGTTT CGGCTAAAAT TTACGAACAA AAGCTAGAAG AGTCACCGTT TAAAAACTCA 
GACCTTATCA AACCTGACGT GGCATGGTAT AGAAAACTGT TTGAATAG
 
Protein sequence
MKRFSKFLAV VALLGLFSGC AEKYTELYNL TPDEWYAQVI ADIKDGDLES ADKHYVSMAS 
EHVASPLLEQ ILLILAQAHA NDEEYLMANH YLDEYIKRYG DNGPKTEFAQ YLKIKANFDS 
FTQPNRNQKL MEDSVTEIEK FLYMYPNTEY KPLIETMLIK FKLALYFLDM QIADLYKRTG 
RDVSAKIYEQ KLEESPFKNS DLIKPDVAWY RKLFE