| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1790 |
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| Symbol | |
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| ID | 5596648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 53005 |
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| End bp | 54336 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640928662 |
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| Product | hypothetical protein |
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| Protein accession | YP_001465984 |
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| Protein GI | 157163861 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACCTAC TAAAAGACCC GCTAAATAAA CTAATCATCT CACTCTCGCT GCCAGCTGGC
GTGGGCATGA TGTTTAACAC CCTTTACAAC GTCACTGGCA CATTTTTTGC AGCTAAAATT
TCTACCATAG CAGTTGCTGG CATGGCGATG AGCTTTTTGC TCTATCTAAG CATCGTTGGC
ATCGGGCTTG GCTTTGGCTC GGCACTCACC GCGCTAATAG GCAACAGCCT AGGCGCAAAC
AAACCAAAAA TGGCTAAACT TTACGCCTCA AATGGCATCA TCTTTGTGCT AGTTTTTGCC
CTTTTTATGG GGCTTTGTGG CTACTTGCTA GCACCAAATT TACTAGTTAT TTTAGGCGCC
GATCACCACT ACATAAAAGA GGCGCTTGAC TACGCTGGTG TCATCTTTCT TGCAGCTCCA
TTTTTCTTGC TTATAAAATC GCTTAACGGC GTTCTAGTAG CGCTTGGCGA TACTAAAAGC
TACCGCAACT GGCTATTTTG CGGCCTTTTT ATCAACGCAT TTTTTTGCTA TCTTTTTGCC
TTTGGCTTTG ATCTTGGCGT AAAGGGCCTT GCTCTAGCAA CGGCTAGCGT GCAGTTTTTA
GGCATGATCT ACCTCTTTTT TAAAGTTAGA AAGAGCAAGA TGATAGATCC TAGAAATTTA
GGCTACTTCG TACCAAATTT CGCCGTCTGG GCAAAGATAC TAAAGCAAGC CTTGCCAGCT
TGTCTAAACT ACCTCTCAAT GTCGCTTGGC TCGCTCGTGC TTTTAAAATT TGTGAGCTTT
TACGGCGTAA ATGCAGTGGC AGGTTATGGC ATAGCCTTAA GGATCGAGCA AATTCTAGTG
CTTCCAACCA TCGGCATGGC AGCAGGAGTG CTTAGCATCA TCTCAAGAAA CTACGGGGCT
AAGAGCTTTC AAAGAGTATT GCAGTGCTAC AAACTATCGC TTCTTTTTTT GCTCATCTAC
TGCGTCTTTG CCTACATCTT TATAAGGCTT TTTGGCGAGA GCGCGATCAA ACTCTTTGAT
GGCACGCCAG CCGTGCTTGA GGTAGCCAAA CTCTACCTTG GCATCAACTC ACTTGCCTAC
ATGGCTTACG GCACGATAAA CATCTCAGGC AGCACCTTGC AGGCGATAAA ACGCCCAGTA
GCGATCTTTT TACTAAATGG CTTTAGACAG CTCGTGCTTC AATGCTCGCT CTTTTACGTT
GTAGTCTTTT GGCTAGGACT TGAGGTCAAA TTTATGTGGC TAGCGCTCTT TTTTAGCGTC
TATTTTACGG CGATTTGCTT TTTGGCTTGG ACGCTTTTTA GGTTAAAAAG AGCTACGAGC
GCAAGCTTTT AA
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| Protein sequence | MDLLKDPLNK LIISLSLPAG VGMMFNTLYN VTGTFFAAKI STIAVAGMAM SFLLYLSIVG
IGLGFGSALT ALIGNSLGAN KPKMAKLYAS NGIIFVLVFA LFMGLCGYLL APNLLVILGA
DHHYIKEALD YAGVIFLAAP FFLLIKSLNG VLVALGDTKS YRNWLFCGLF INAFFCYLFA
FGFDLGVKGL ALATASVQFL GMIYLFFKVR KSKMIDPRNL GYFVPNFAVW AKILKQALPA
CLNYLSMSLG SLVLLKFVSF YGVNAVAGYG IALRIEQILV LPTIGMAAGV LSIISRNYGA
KSFQRVLQCY KLSLLFLLIY CVFAYIFIRL FGESAIKLFD GTPAVLEVAK LYLGINSLAY
MAYGTINISG STLQAIKRPV AIFLLNGFRQ LVLQCSLFYV VVFWLGLEVK FMWLALFFSV
YFTAICFLAW TLFRLKRATS ASF
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