| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1556 |
|---|
| Symbol | |
|---|
| ID | 5597462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 539145 |
|---|
| End bp | 540533 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640929124 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466432 |
|---|
| Protein GI | 157165221 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.737532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTAT TTGGACTTCT AGGCTTGTTT TTTGCTATAG CCTTTGGTGC TGACGGAGAA
GCTGCGGCTA TTGACTTAAC TACTACATGG GCGGGAATTT TATCGCTTAT CATTTTTGTT
GTTGGATACT TTTTCATAGC AGCAGAAGAG AATTTTCACA TCGACAAGGC AAAACCTGCC
ATTTTTATCG GCACTTTTAT GTTTTTGCTA ATCGGCGTTT ATATGCTTAT AAACGGCATG
GATGTGCATT CGCTAGAAAA TGAGGTAAAT CACCTGATCT TAGAGATAGC TCAGATCGTA
TTTTTCTTAA TGGTAGCGAT GACATTTATC GAAGCACTTG TTGAAAGAGA TGTATTTAAC
GCACTTAAAT ACAACCTAGT TTCAAAAGGC TACACTTACA GAAAGCTATT TTGGCTAACT
GGAATTTTGG CATTTTTCAT TAGCCCAGTG GCTGATAACC TAACAACAGC GCTTATCCTA
TCAACTGTTC TTTTAACGAT AGATAGAAAT AATACAAATT TCTTAGTCGC AGGTGCGATA
AACATCGTCG TAGCAGCAAA TGCAGGCGGA GCGTGGAGTC CATTTGGCGA TATCACTACA
CTTATGGTTT GGGCAGCTGG CAAGTCACCA TTTTTAGACT TTTTCGCACT TTTCCCAGCT
TCATTTATCG GCTGGTTTGT GACAGCGTTT TTACTTTCAC GCATCGTGCC AAATACTGCG
CCTCATTTCG ACGTCGCAAA TGAGCCAAAA GTGGTTATGA AAAAGGGCGG TAAAGCGGTT
ATCTTTATAG GTGCATTTAC TATCTTTTGT GCAGTTATGA TGCACCAGTT GTTTCACTTA
CCAGCGATGT GGGGCATGAT GTTTGGCTTC TCGCTACTTA GCCTTTATAC ATATTATTTC
AAAAAAGCTC ACAAAGATGA AGAGCCTATG AACGTCTTTC ACTATATGTC AAAGATAGAG
AACAACACGC TATTTTTCTT CTTTGGAATT TTAGCTGCAG TTGGCGCTCT TCACTTTGCT
GGATTTTTAA ATTACGCTGT GTCACTTTAT GATAAATTTG GCTCAACACC TGTAAATATC
GGAGTTGGCT TCCTCTCAGC AGTAGTTGAT AACGTCCCTG TTATGTCAGC CGTTCTAAAA
GCAAATCCAG CTATGGGAGC TGATGCGGGC GAGGCTATGA GTCAGTGGCT ACTTGTGACA
CTTACAGCTG GTATCGGCGG TTCTATGATC AGCTTTGGCT CAGCAGCTGG CGTTGGAGTA
ATGGGTAAAT TAAAAGGAAT TTATACCTTT GGTGCGCATA TGAAATATGC ATGGATGGTA
GTTTTAGGAT ACATCGTATC ACTCATTGTT TGGTATGTGC AGTTTGAAAT TTTTCACATC
TACTTTTAA
|
|---|
| Protein sequence | MRLFGLLGLF FAIAFGADGE AAAIDLTTTW AGILSLIIFV VGYFFIAAEE NFHIDKAKPA
IFIGTFMFLL IGVYMLINGM DVHSLENEVN HLILEIAQIV FFLMVAMTFI EALVERDVFN
ALKYNLVSKG YTYRKLFWLT GILAFFISPV ADNLTTALIL STVLLTIDRN NTNFLVAGAI
NIVVAANAGG AWSPFGDITT LMVWAAGKSP FLDFFALFPA SFIGWFVTAF LLSRIVPNTA
PHFDVANEPK VVMKKGGKAV IFIGAFTIFC AVMMHQLFHL PAMWGMMFGF SLLSLYTYYF
KKAHKDEEPM NVFHYMSKIE NNTLFFFFGI LAAVGALHFA GFLNYAVSLY DKFGSTPVNI
GVGFLSAVVD NVPVMSAVLK ANPAMGADAG EAMSQWLLVT LTAGIGGSMI SFGSAAGVGV
MGKLKGIYTF GAHMKYAWMV VLGYIVSLIV WYVQFEIFHI YF
|
|---|
| |