| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1522 |
|---|
| Symbol | |
|---|
| ID | 5597309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 504592 |
|---|
| End bp | 505788 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640929092 |
|---|
| Product | putative methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_001466400 |
|---|
| Protein GI | 157165177 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGAGT ATCTTAAGCT TTTAAAGGAT GAGAGAAATT TCCGCCTTTT AAGCACCATC
CAGCTCATGT GCTACTTTGG CGTGTGGTTC TCGCACACAG GCATTTTCAC GCTACTTATC
TCGCTTGACG CTCCTGTTTG GGCACTTACA TTAAGTGCGG CGATGGCATT TATCCCAGGC
GTTGTCATCG CTCCATTTAG CGGCATTTTA GTTGATAAAT TTAGCCCAAA ACCTATGCTT
GTTATCATGA TGGCGGTTGA GACCATAAGC GTTTTTATGC TGCTTTTTAT AAACTCACTT
GATTTTTTAT GGCTACTTTT GCTTATCATT TTTGTTAGAA ACGGCGTTGG CGGGATGTAT
TTTCAAGTAG AAATGAGCGT GCTGCCAAAA ATTTTAAGCA AAGAGAGCCT AAAGCTTGCA
AATGAGATCC ACTCGATCAT CTGGGCGGTC TCATATACCG CTGGCATGGG GCTTGCCGGG
GTTTATATAC ACTTTTTTGG CATCAAAAGT GCATTTTTGC TTGACGGAGC TCTTTATCTT
TGCAGTTTTG GCTTTTTATA TCTTTTAAAG CTAGATGAGC TAAAGCCAGA ATTTATAGAA
AAACCTCTAA AAATGCTCAA AAATGGGCTT AAATATCTAA AAGAAAATAG GCTCATCGTA
CATCTTATAT TTTTGCACGC CTTTGTTGGC ATCACAGCTT ATGACGCACT GATCGCGCTT
TTGGCCGACT ATAAATACGC AAATTTACTC TCAACCTCGC TAGTTATTGG CCTATTAAAC
GCCTCAAGGT CGATCTCACT TATGTTTGCA CCAGCCTTGC TTAGTAAATT TATGAATAAA
AAAACGCTCA TCTACATCTA CATCGGTCAA GGAGTTGGCA TCATCATCTG GGCGCTCTCT
TTGCAGAATT TTTATCTCTC ACTCATTGGC ATCATCTTTG CTGGATTTTG CACTTCAAGC
CTTTGGAGCT ACACCTACAC GCTGCTTCAG CAAAACTGCC AAAAAGAGTT TTACGGCAGA
GTGATCGCGT ATAATGATAT GATTTTTCTT GGATTTAGCG CGCTTATCTC ATTTGCGATC
GGCTTTTTAT ACGAGCTTGG ACTAAGCGTG GAGACGATCG CAGCCTTTAT GGGAAGCCTC
TTTTTCGTTG GAGCCTTTTA CTACCACGTA GTTTCAAAAA GGTATGAGAT AAGATAG
|
|---|
| Protein sequence | MKEYLKLLKD ERNFRLLSTI QLMCYFGVWF SHTGIFTLLI SLDAPVWALT LSAAMAFIPG
VVIAPFSGIL VDKFSPKPML VIMMAVETIS VFMLLFINSL DFLWLLLLII FVRNGVGGMY
FQVEMSVLPK ILSKESLKLA NEIHSIIWAV SYTAGMGLAG VYIHFFGIKS AFLLDGALYL
CSFGFLYLLK LDELKPEFIE KPLKMLKNGL KYLKENRLIV HLIFLHAFVG ITAYDALIAL
LADYKYANLL STSLVIGLLN ASRSISLMFA PALLSKFMNK KTLIYIYIGQ GVGIIIWALS
LQNFYLSLIG IIFAGFCTSS LWSYTYTLLQ QNCQKEFYGR VIAYNDMIFL GFSALISFAI
GFLYELGLSV ETIAAFMGSL FFVGAFYYHV VSKRYEIR
|
|---|
| |