| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1480 |
|---|
| Symbol | |
|---|
| ID | 5596172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 698117 |
|---|
| End bp | 698911 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640929269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466571 |
|---|
| Protein GI | 157164590 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA GATTTTTAGC ATCTAAGGTC TTTAGCAGCG TTGCCGCTCT TTGTTTATTT
GCTGGATGCG CTAGCAGCAA TAGCGGTGTA ACTGGTGCCG CAGCAGGAGA TACAGCCAAA
AATGCCAACA CGAAAATCGA GCGTTGCAGC CAAACGCTAG GAACATTGTC TTTTTACGAG
GATCAAAGTA GCTCATGGTA CTCATATCTA ACTAGAGATT ATCAGCTTGG CTCAACTGTG
CCGGTGCTAA GGATCTTAGC TCAGCAAACT GGCTGCTTCG TCATAGTCGA GCGTGGCAGA
AGTATGGATA ATATGATGCA AGAGCGCGCG CTTGAAGCTA GTGGCGAGCT AAGAAAAGGC
TCTAAATTTC ACAAAGGTCA AGTCGTAGCG GCTGATTATA CTATGCAGCC AGAGATCACA
TTTAGCAAAG AGGATACTGG CGGTATCAGC GGACTTGTAG GCGCTGTCTT TGGCAACGTT
GCCGGCAAGG TAAGCGGAGG CTTTTCAAAG AGCGAAACAC AAACATCTTT GCTTCTCATA
GACAACCGCT CAGGCGTACA GATCGCTGGT GCAGTCGGCA GTGATAGCAA CTTTGACTTC
TTTGGCATGG GGTCAAATTC ATTTTCACGT GTGAGCGCTG GACTTGGTGG CTACACAAAG
ACACCAGAGG GCAGGATGAT CGTAAATGCC TTTATGGACG CGATGAACCA ACTTATAGTC
GCTCTAAAAG ATTATAAAGT CCAAAATGTA AAAGGTGGTC TTGGCAAAGG CGGAAATATA
AAAATAGGAG ACTAA
|
|---|
| Protein sequence | MKKRFLASKV FSSVAALCLF AGCASSNSGV TGAAAGDTAK NANTKIERCS QTLGTLSFYE
DQSSSWYSYL TRDYQLGSTV PVLRILAQQT GCFVIVERGR SMDNMMQERA LEASGELRKG
SKFHKGQVVA ADYTMQPEIT FSKEDTGGIS GLVGAVFGNV AGKVSGGFSK SETQTSLLLI
DNRSGVQIAG AVGSDSNFDF FGMGSNSFSR VSAGLGGYTK TPEGRMIVNA FMDAMNQLIV
ALKDYKVQNV KGGLGKGGNI KIGD
|
|---|
| |