Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1050 |
Symbol | proS |
ID | 5596445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 830867 |
End bp | 832567 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640929397 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_001466693 |
Protein GI | 157165397 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000328969 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA GTAAATTTTA CGCCCCAACG ACCAAAGAAG CGCCAAAAGA TGCATCTTTA CCAAGCCATC AGTTTTTGAT AAGGGGTGGC TTTGTCGAGC AGATCGGCTC TGGGCTTTAT AACTATCTGC CGCTTGGAAA GATAATGCAT GATAAAATTT CACGCGTGGT AAAAGAGGAG ATGAACGAGG CTGGCGCGCT GGAGGTGAGC TTTAGCGTGG TCACTTCAGG CGAGCTTTGG AAGCAAAGTG GTCGCTACAA TGTCTTTGGC AAGGAGCTTT TGCGCTTTAA AGATAGAAAG GATAATGACT TTGTCATAAG CCCGACAAAC GAAGAGGCAG CCGTTGCCTT AGTGCGTGGC AAGGTGACTA GCTACAAGCA ACTACCACTA AATTTATACC AGATAAACAC CAAATTTCGT GACGAGGCAA GACCACGCTT TGGCTTGCTA AGAGGTCGCG AATTTACGAT GAAAGATGGC TATAGCTTTC ACTCTAGCAA AGAGGATCTT AAGCGTGAGT TTGACCTTAT GGAGGCAACT TATAGTAAGA TTTTTACCCG CTTGGGGCTA AATTTTAGAG CTGTTGAGGC TGATAGCGGA GCCATTGGCG GTAGCGGCAG TAAAGAATTT ATGGTGCTTG CAAGTAACGG CGAGGACGAC ATACTTTGCT GTGAGGCTTG CAGATACGCT GCAAACGTCG AGGCTGCAAG ACGCAAACCA AGAGTTAGCG AGGCTGAGGC GCCAGAGGCA GATGCGGCTA AATTTCTAAC GCCAAATGCA AAAACTATAA AAGATGTGGC GGAGTTTTTC AAAGTTAGCG AGTTTTACTG CATAAAAGCT GTTATGAAAA AGGCGATTTA TGAGGATAAA GAAGAGGTCG TGGTCTTTTT CGTAAGGGGC GATGACGAGC TTCAGGAGAC AAAGGCACAA AATGCTTGCA AGGCGCTAGA GCTTGTCGAT GCTAGCGAGG CCGACGTGGC TAAAGCTGGG CTTGTGGCTG GATTTTGCGG GCCAGTTGGG CTAAAGGATG TGAAATTTTT TATAGATAAC GAGCTAAGGG GCGCAAACAA CATGATATGC GGCGCTAACG AGAAGGACTA TCACTTTGTC GGCGTTAGTG TTAGCGGATT TAACGAAGAG AGATTTAAAG ACCTTGTAAA GGTAAAAGAG GGCGATAAAT GCCCAGTTTG TGGCGGAAAT TTAAAACTTA GCAAAGGCAT AGAAGTAGGT CATATATTTC AGCTAGGCGA TAAATACTCA GCTGCGATGA ACGCGACATA TCTTGATGAA AATGGCAAGG TTAAGCCATT TTTGATGGGC TGCTACGGCA TTGGCATAAG CAGGCTTATC GCTGTGATGA TAGAAGCTAG CCACGATGAA AAGGGCTGCA TTTGGAAAAA AGAGTGCGCG CCGTTTGATG TGGAGATCAT CATCTCAAAT TTAAAAGATG AAGCGGGCGT GAAATTTGCA TTTGAGCTTT ATGAGAGCCT CAAAAAAGCT GGCGTTAGCG TCATTATCGA CGATAGAAAC GAGAGATTTG GCGTTAAAAT GAATGATTTT GAACTTATCG GCTTTCCTTA CGCGCTGCTT GTGGGTAAAG AATTTGCAAA TGGCAAGGTT GAGTTTATCA CGAGAGATGG GCTAAGCAAA GAGACGATAG AGGCAAACGA TGCCTTTAGA AAGATAAAAG AAAGCTTATG A
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Protein sequence | MKFSKFYAPT TKEAPKDASL PSHQFLIRGG FVEQIGSGLY NYLPLGKIMH DKISRVVKEE MNEAGALEVS FSVVTSGELW KQSGRYNVFG KELLRFKDRK DNDFVISPTN EEAAVALVRG KVTSYKQLPL NLYQINTKFR DEARPRFGLL RGREFTMKDG YSFHSSKEDL KREFDLMEAT YSKIFTRLGL NFRAVEADSG AIGGSGSKEF MVLASNGEDD ILCCEACRYA ANVEAARRKP RVSEAEAPEA DAAKFLTPNA KTIKDVAEFF KVSEFYCIKA VMKKAIYEDK EEVVVFFVRG DDELQETKAQ NACKALELVD ASEADVAKAG LVAGFCGPVG LKDVKFFIDN ELRGANNMIC GANEKDYHFV GVSVSGFNEE RFKDLVKVKE GDKCPVCGGN LKLSKGIEVG HIFQLGDKYS AAMNATYLDE NGKVKPFLMG CYGIGISRLI AVMIEASHDE KGCIWKKECA PFDVEIIISN LKDEAGVKFA FELYESLKKA GVSVIIDDRN ERFGVKMNDF ELIGFPYALL VGKEFANGKV EFITRDGLSK ETIEANDAFR KIKESL
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