| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0699 |
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| Symbol | truA |
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| ID | 5596597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 716102 |
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| End bp | 716833 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640929286 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001466582 |
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| Protein GI | 157164133 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.148099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTC AGCTAATCTA CAGCTACGAT GGCTCGAAAT TTCAAGGCTC GCAGACCCAG
CCACACGAAA ATGGCGTAGA GGATGAGTTA GAGCGCGCCC TAGCTCACGT TGGCATTTTC
GAAAGAGTGG TCTCTAGCTC GCGCACTGAT AAAAGCGTGC ACGCAAATAA CCAAAGCTCA
AGCGTCATTT GCGGCGATCA CTTTACAAAT TTAGAGCGCC TAAGAGATCT CATAAACCAC
CACGCACACC CAAGCATTCA TATAAAACGC ATAAATTTGG TAGATGAAAG TTTTCAAGCG
AGATTTGACG CAGTAGCAAG GTCGTATAGG TATGTGATAG ATCACGGCAA ATTTGATGTT
TTTAGCTCAA ACTACAAGGT GTTTTTGCCT AAATTTGACA TCGAAAAAGC AAATGAAATT
TTGCGTAATT TTATCGGCGA GCATGATTTT AGCGCATATA TGAAAACTGG AAGCGATACA
AAAAGCCCAG TGAGAGAAAT TTATAAAGCA TTTTGCTACA CATACAAAGA GCAAACTATC
ATAGTTTTTA AGGCAAATGG CTTTTTGCGC GGCCAAGTGC GCCTCATGGT TGCAAATTTA
TTAAAAGCGC TAAAACAAAA AGATGGTGGC AAGCTCATCA AAGCTTCGCT AAATGGACAT
CCTGCCCTAA CTCGCATACC TGCGCCTGCT GAAGGGCTAT ATCTAAATAG AGTTTTTTAT
AAATTTAACT AA
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| Protein sequence | MKIQLIYSYD GSKFQGSQTQ PHENGVEDEL ERALAHVGIF ERVVSSSRTD KSVHANNQSS
SVICGDHFTN LERLRDLINH HAHPSIHIKR INLVDESFQA RFDAVARSYR YVIDHGKFDV
FSSNYKVFLP KFDIEKANEI LRNFIGEHDF SAYMKTGSDT KSPVREIYKA FCYTYKEQTI
IVFKANGFLR GQVRLMVANL LKALKQKDGG KLIKASLNGH PALTRIPAPA EGLYLNRVFY
KFN
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