| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0688 |
|---|
| Symbol | |
|---|
| ID | 5597079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 724894 |
|---|
| End bp | 726159 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640929294 |
|---|
| Product | L-seryl-tRNA(Sec) selenium transferase |
|---|
| Protein accession | YP_001466590 |
|---|
| Protein GI | 157163962 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.207036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TTTTATTAGC ACTTTTGCCT TTGGCGCTAT TTGGATCAAA TTTAAGTGAG
ATAGCAAACA AGGCCACTCA AAATGAAATT TCAAAGATCA AAGAGCTTGA GCTAAAAAGA
GCAAACTTAA GTGACGAAGC GACATCAAGC GCCTACTTGC CAAGCCTTAG CCTAGAGGGC
TCATACGGCA AAAACGCAAG CACCTTCCCA AGCATAGTTG CCAAAGAGTC AGCTGGCGTG
CTAGCTAGGA TTGATTTTTT GCTATATGAT GGTGGAGCTA GAGAGGCTAG GCTAAAGATG
AGCCAGCTTT TAAAAAATAA AGCCGCTATC GCAAACGATG AAGCCAAAAA CTACCTTGCT
TTTAAGGCTG TAAATTTATA CTTTAACGCC TGCGCGCTTG AAAATATAAT AGCTGCCAAA
AACGCTCAGG CAAATTTCTT AAAAGGCGTT TTAGACAAGC TTGAAAAGGC AAATAAAGCA
GGGCTTGCAC CAAAAGATGA GCTAGAAAAT GTGCGGGCAA AATACCACTT GGCAAACAGC
GTGGAGCTTG AATACAAAAA CAAGATGGAG CAAATTTTAA ATGAGATAAA TTTGCTAATA
GGCGAGCAAA TTTCACCACT TAGCGGGGCA AAAATGGCTG AGATTGGCTC AAAATTAGCT
TCAAAAAACG CCGAGCTCGA CAGGTTAAAT CAAGATATTT TTATAAGCGA AGCTAAGCTT
AGCGAGACAA GAGCTGGCTT TTTGCCCCAA ATTTCGCTTT ATGACACCTA TGGATTTTAC
AAAAATAACT ACGACATCGA CCTTGGCAAG TATAGCGCGT ATCGTCCATA TCTTGATAAA
TATCTAAAAG AAGATACGCA CGGCAATAAA TTTGGCGTTA GCTTCAGGTG GAAAATTTTT
GACTTTTTTG CCACTAGCAA GATGAGCCAA GCTAGCAAGA TCGCGCTTGA TGAAGCGAGG
CTAAATTTAG AGTACAAAAA GCGTGAAAAT GAGACCAAAC TTAAAAATTT ACAAAACGAG
ATCGCAACTC TTAGCTCAAA GATAGCCTCG CTAAACGAGT ATTTAAAAGC AAGCAATCTT
GCGCTTAGAG CAAGCTTTGA GAAGTATAAC TCTGGGCTTT TAGGATATAG CGACCTGCTT
GAAGCACTTT CTCAGAAATT TGATGCCATT AGCCTTTTTG AAGGGGCGAA AGATGAGCTA
GAGATCAAAA AGGCGGAGTA TTTTTTTGAG AGCGGAGAGA GCATTTTAGA GAGGATTAGG
GATTGA
|
|---|
| Protein sequence | MKKILLALLP LALFGSNLSE IANKATQNEI SKIKELELKR ANLSDEATSS AYLPSLSLEG
SYGKNASTFP SIVAKESAGV LARIDFLLYD GGAREARLKM SQLLKNKAAI ANDEAKNYLA
FKAVNLYFNA CALENIIAAK NAQANFLKGV LDKLEKANKA GLAPKDELEN VRAKYHLANS
VELEYKNKME QILNEINLLI GEQISPLSGA KMAEIGSKLA SKNAELDRLN QDIFISEAKL
SETRAGFLPQ ISLYDTYGFY KNNYDIDLGK YSAYRPYLDK YLKEDTHGNK FGVSFRWKIF
DFFATSKMSQ ASKIALDEAR LNLEYKKREN ETKLKNLQNE IATLSSKIAS LNEYLKASNL
ALRASFEKYN SGLLGYSDLL EALSQKFDAI SLFEGAKDEL EIKKAEYFFE SGESILERIR
D
|
|---|
| |