Gene CCC13826_0555 details

Gene Information

• Locus tag: CCC13826_0555
• Symbol: ribE
• ID: 5597016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: -
• Start bp: 1563980
• End bp: 1564594
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640930111
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_001467390
• Protein GI: 157165754
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.560873
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAATG GCTTAATCAG GGAGCTTGCC GAGGTCATTA GCTACTCGCA AAATGTTTTA 
CGGCTAAAGG CTAAATTTCG TCCAAATTTA GGCGACAGCA TCGCAGTAAA TGGTGCATGC 
TTGAGTGTGA TAAAACTATA TGATGATGGC TTTAGCGTGG AGCTAAGCGC AGAGAGCAGG 
GCAAATATCG CGGTTGAAAA TTTAAGTGGC TTGGTGCATA TCGAGCCCGC GATGAAGCTA 
GCAGAGCGAG TAGATGGGCA TTTGATGCAA GGGCACATCG ACTTTATCGG CGTGATCTCA 
GCTATAAAAA AGCATGAAAA TGGCGTTGAT TTTTACATCG ACTTGCCACG TGAGGCGATG 
GCTCTGATGG CAAACAAGGG CTCGGTGGGC GTTGAGGGCG TGAGCCTTAC GATAAATGAA 
ATTTTGCCAA AGGGCATAAG ACTAACCATC ATACCGATCA CATTTAGAGA TAGCCTTTTT 
GGCACTTTCA AGGTCGGCAG GCGCGTAAAT ATCGAGAGTG ACCTGCTGGC TCGCTACGTG 
GCTAGGATGC TTGAGGCCAA GCAAAATGGC GGTCTTAGCT GGGACGAGGT CGAGAGAATT 
TCAAGCCTTT ACTAA 

 

Protein sequence

MFNGLIRELA EVISYSQNVL RLKAKFRPNL GDSIAVNGAC LSVIKLYDDG FSVELSAESR 
ANIAVENLSG LVHIEPAMKL AERVDGHLMQ GHIDFIGVIS AIKKHENGVD FYIDLPREAM 
ALMANKGSVG VEGVSLTINE ILPKGIRLTI IPITFRDSLF GTFKVGRRVN IESDLLARYV 
ARMLEAKQNG GLSWDEVERI SSLY