| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0458 |
|---|
| Symbol | |
|---|
| ID | 5595883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1465372 |
|---|
| End bp | 1466889 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640930021 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001467300 |
|---|
| Protein GI | 157165148 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.320222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATCA ATCTAATAAG CTCGATTGTC GTTTTTGTCG TATCAATGGG CATAAATTTC
TTTCTTACGC CATTTATCTT AAAAAGCCTT GGCAACGAGG CATTTGGCTT TGTGGGACTT
AGTAACGCCA TCGTTAGCTA CGCAGCGGTC GTAAGTGTAG CCATAAACTC AGTGAGCGGC
CGCTTTGTCG CTCATGCCTG GCACAAAAAA GACCTAAGCC TTGCAAACAC CTACTACTCA
TCAGTGCTTG TTGTAAATAT CTTCTTTTGC GCCGTTGTCG TGGCGATAAG CTCCATCTTT
ATACTAAATT TACAAAGCTT TTTAAACGTC CCTGAAAATT TACTCTTTGA CGTGAGAATG
ACCCTTGTTT TTTACTTTAT AAATTTCTGC GTCGGGCTAT TTAACGGCGT TTTGACAGTC
TGCGCCTTTG TGACAAACAA GCTCTATCTA CTCTCCATCA GAAATGCCAT CTCAAGCGCG
ATCCTAGCAA CGCTTATCGT CGCACTTTTT TACTTTTTTA AGCCATTTAT CTCTTACATC
GCCATTTCAG CGCTAGTTGC TAGCCTTTTT GTCTTTTTTA GCACCATTTT TATGTCAGCT
CGCATCACGC CGGAGCTAAA ATTTAGCTTT AGTAAATTTG ACTTTTCTAA GATAAAAGAG
CTTCTTAGCT CTGGCATTTG GAATAGCTTT AATGCGCTAA ACCGTATACT TTTAACAGGC
ATGGACCTAT TTATTTGCAA CATTTTCGTA AATGCAAACG CCACTGGTCT TCTTTCAGTT
GCCAAGGCCG CTCCTATCAT ACTTGAGAGC TTTGTAGCTC AGCTTAGCGG CATCTTTGCG
CCAAAATTTG TCGAGCTTTA CTCTAAAAAT TTGATCACGG ACCTCATAAA AGAGGCTAAA
TTTTCGATGA AGGTGATCGC CTTTGTGATG AGCGCTCCGG CTGCGTTTTT CGTCGTTTTT
GGGCTTGATT TTTACACGCT TTGGCTGCCG TTTAAAAGTG CTGATGAGGT TAAATTTATC
TACAACGTCT CGATGATCAC GCTTGTGCCG ATCGTCTTTA TAAGCTTTGT TTTTTCGCTT
TTTAACCTTG ATAGCGCGAC AAACAAGCTT CGCCGACCAG CTATTGCCAA CACTATTCTT
GGCGCTAGCA CGATCATAGC GCAGATCGCA CTGCTTAAAT TTAGTGGCTA CGGCGTTTAC
GGCATCGTCA TCGTCGCAGC GGTTTTTTAT AGCATTAGAA TTCTTGGCTT TGACCTTATA
AACGCTGCTT TAAATTTAGA GGTGAGGCTC ACCACGTTTT ACGGGGTTTA TTTTAAAAAT
TTAGCCGTTT TTGCGCTTTG CGTGCTTGCG ATGTTTGCCT GCAAGGACTT TGTGAGCTTA
GATAACTGGC TAAAATTTGC TATCTTTGCT GCGATCTACG CCGGCGCAGC TTATGTTTTG
GGATATTTTT TGTTTTTTAA TGCCTTCGAG CGAGGCATAG TCTGGCGTAA AATTTTAAAA
AAATTTAAAA GGTCTTAA
|
|---|
| Protein sequence | MLINLISSIV VFVVSMGINF FLTPFILKSL GNEAFGFVGL SNAIVSYAAV VSVAINSVSG
RFVAHAWHKK DLSLANTYYS SVLVVNIFFC AVVVAISSIF ILNLQSFLNV PENLLFDVRM
TLVFYFINFC VGLFNGVLTV CAFVTNKLYL LSIRNAISSA ILATLIVALF YFFKPFISYI
AISALVASLF VFFSTIFMSA RITPELKFSF SKFDFSKIKE LLSSGIWNSF NALNRILLTG
MDLFICNIFV NANATGLLSV AKAAPIILES FVAQLSGIFA PKFVELYSKN LITDLIKEAK
FSMKVIAFVM SAPAAFFVVF GLDFYTLWLP FKSADEVKFI YNVSMITLVP IVFISFVFSL
FNLDSATNKL RRPAIANTIL GASTIIAQIA LLKFSGYGVY GIVIVAAVFY SIRILGFDLI
NAALNLEVRL TTFYGVYFKN LAVFALCVLA MFACKDFVSL DNWLKFAIFA AIYAGAAYVL
GYFLFFNAFE RGIVWRKILK KFKRS
|
|---|
| |