Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0398 |
Symbol | dapD |
ID | 5597307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1399170 |
End bp | 1400498 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640929964 |
Product | tetrahydrodipicolinate N-succinyltransferase |
Protein accession | YP_001467243 |
Protein GI | 157164870 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTAAATT TAGAGCACAT TAGAAGAGAT ATTATTTTAA AAAAAGGGAT ACATTATTTC GACTACACCG CCTCAGGACT TGCGTATAAA CCTATCGAGG ACGAGGTCGC TGATATCTTA AAAACCTACG CCAACACCCA CTCGCTAACA TCATCAAACG CCTATAAAAC GCAGCATTTG TATGATAGCG CTAGAAGCGA GCTAAAACGC GCGCTTGGGC TTGACGATAG GTTTTATCTC ATAGCCACTG GATATGGCGC CACTGGTGCG ATCAAGAAAT TTCAGGAGCT TTTGGGGCTT TACGTGCCTC CAGCTGCTAA AAGAAGGTTT GATCTAAAGC CAAATAACGA CTCGCCTCTA GTCATACTTG GACCATACGA GCACCACTCA AATGAGATCA GCTTTAAAGA GGCTCTTTGC GAGGTTGAGC GCATAAGGCT GGCAAAAGAT GGCGGTATAA ATTTTGGTCA CTTGGAGCAA ATTTTAAAGA TAAACCAAGG GCGTGAGATC ATCGCTAGCT TTAGCGCAGC CTCAAACGTC ACAGGCGTCA TAAGCGACTA CAAGCAAATT TACACGATGG TTAAGAAATT TGGCGGCATT GTGGCATTTG ACGTGGCGAG CCTTAGTGCT TATGCAAATT TAGACTGCGA CTACTTTGAC GCGCTCTTTA TCTCGCCGCA CAAGCTTCTT GGCGGAGTCG GCAGTTGTGG GCTACTAGCT ATCAAAAAAG TGCTAGCAAA TGACGATGTG CCAAGCTTTG CAGGCGGTGG CACGGTAAGC TATGTGAGCA AAAACTACCA TATATTTTTA AAGGATCAAG AGGCACTTGA AGAGGCTGGC ACACCGCCTA TTTTGGGGCT CATACGTGCA AATTTAGCCT ACAGACTAAG AGAAGAGATA GGGCTTGCTA CCATTTATGA AAACGAGAGC GAGCTTAGCG ACTATCTTTG CCAAAGGCTA AGGGAAATCC CAGAGCTTAT AAGCTACTGT CCGGCAAATT TAAAGCGCCT TGCCATTTTT TCATTTAATG TAAAAAACGT AGCTCCATAC GAGCTTTCAA AAATTTTAAG CAAAGAGTAT GGCATACAAA CACGCGCTGG CTGCTCGTGC GCAGGCTCAT ACGGACATGA TCTTTTGGGG CTAAAAGAGG ATCCAAGCTT CACCCACAAG CCTGGTTGGG TGAGAGTTAG CCTGCACTAT ACGCACACCT TTGAGGATAT TGATTATTTG GTGAGTGCGA TCAAGAAAAG TATTGAGAAA TACGCACTTT CGTGGCAGGT TAAAGACCCT TTTGACGTAA AAGAGATAAG TGGGTGTGTG GGTGAGTAA
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Protein sequence | MVNLEHIRRD IILKKGIHYF DYTASGLAYK PIEDEVADIL KTYANTHSLT SSNAYKTQHL YDSARSELKR ALGLDDRFYL IATGYGATGA IKKFQELLGL YVPPAAKRRF DLKPNNDSPL VILGPYEHHS NEISFKEALC EVERIRLAKD GGINFGHLEQ ILKINQGREI IASFSAASNV TGVISDYKQI YTMVKKFGGI VAFDVASLSA YANLDCDYFD ALFISPHKLL GGVGSCGLLA IKKVLANDDV PSFAGGGTVS YVSKNYHIFL KDQEALEEAG TPPILGLIRA NLAYRLREEI GLATIYENES ELSDYLCQRL REIPELISYC PANLKRLAIF SFNVKNVAPY ELSKILSKEY GIQTRAGCSC AGSYGHDLLG LKEDPSFTHK PGWVRVSLHY THTFEDIDYL VSAIKKSIEK YALSWQVKDP FDVKEISGCV GE
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