Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0165 |
Symbol | |
ID | 5596939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 349168 |
End bp | 351186 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640928940 |
Product | AAA ATPase, central region |
Protein accession | YP_001466250 |
Protein GI | 157164659 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAAAAG AGATTTTTTA CGTAGATAGC GAGATATATG AGCTTACGAC ACTTTGGACA CTTCGTGCTA TTTTTAATCT CGGAGGAGAA AGAGAGTTAC TAAGAAGCGG ATATGACGAT GTTTTAGATT TTTTGGGTAT CGAGTCAAAA GAGCCCAAAG AAGAAGAGAT TCAAAATCTT AAAAACAGAC TTGAAATTCT TGAAAAAAGT CAAATTTCAT GCGAGCTAAA AGATCTTGAA CACAACCTAA ATTTACTTCA AAAAAATTTA GGTCTAAATA GTACCGAGAT AGATATTTTG AGATTTGTTG CGATCATGTA CAACTACGAA GTGATATCTA ATGCTTGCAG TTTACTAGGA GATCTAAACA ATATACAAGC CACAAAAGCT ATCTCAAAGA TACTAAATTT ACGTTTTGGC GATGTTCAAA AAGCCTTTAG AAAAGATGGA ATCTTTGCCA AGACTTCGAT TGTAAAGCTA GAAAATAATG TGCATAATCT AAAATTTAAA ATTGATGTCA TAAACAATAA CTTTATGTGT GATTTGTTTG TTAAATGTGA AAGCATGGAC GAGATATTTG AAAGCGCGAT AAAGCCGTGT AGCAAGACAA ATTTGACAAC AAAAAATTAT CCTCATATAA AAGAAGATGT GAAAATTTTG CTCTCGTTTC TAAAAAATGC CGTTAGCAAA AAGCAAAAAG GAGTAAATGT GCTTTTATAC GGCTCAGCAG GGACTGGTAA AACCGAGCTT AGTAAAGTGA TAGCCAGTGA GCTAAATTTA AAGCTTTATG AAGTAGCTTA TGATGATGAA TACGGATATG CGACTGAGGA TCGAAGGCTA AGGTCATATT GCCTTGCACA AAATGTATTG TCTGCTGGAT CAAATTTGCT CATGTATGAC GAAGCGGAGG ATATATTTAA CACAAATAAT GACGAAAAAC GACAGTATGG TAAAGCCTTT ATAAATAGAT CTCTCGAGAC TAACTACCTG CCTACCATCT GGATAACTAA CAATATCCTT GACATGGATG AAGCTGTAGT TAGAAGGTTT AACCTAGCCA TAGAGATAGG CATACCTACT GAAGATGTAA GAGCAAAGAT CATAAAAAAA TATAGTGAAA ATTTGATAGA TAATAAACTT GTTAAAAAGC TGGCTAAAAA TCGATTTGTA GCGCCAGCAG TCGTTAGTAA TGCTAGCTTA GTCGTTTCAA ATTTAAACAC AAAAGATAAA AATAAAGCTT TTGAGCGAGT GATAAGCAAC ACTCTAAAAG CACAAGGCTA CGATGAGATA GAAAAAGATG AAAAACCAAG CGCTGATCTG CCAAGCAGCT ATGATCCAAA TTTCGTAAAC TCAGACTGCG ATCTAAACGA GCTAATACAA GGCATAAAAG AAAGCAAAAG CGCAAGGATA TGCCTTTATG GCGTGCCTGG AACTGGCAAA AGCGCTTACA CTAAATTTAT CGCTAAAAGC CTTAAAAAGC CGATCATCAT CAAAAAAGGA AGCGATCTTT TATCTATGTT TGTAGGAGGG ACTGAGAAAA ATATAGCACT AGCTTTCAAA GAAGCCAAAG ATAAAAAAGC TGTGCTAGTC TTTGACGAAG TAGATAGCTT TTTGCAAGAT AGAAGCATGG CCGCAAGAAG CTGGGAGGTA ACTCAAGTAA ATGAGATGTT AGTGCAAATG GAGAGCTTTG ATGGTATCTT TATCGCCACG ACAAATTTAA TAGACAACCT TGATAAAGCC TGTCTTAGAA GATTTGATCT AAAGCTTGAG TTTGGATACT TGCTGCCAGA GCAAGCAAGA AATTTGTTTA AAAAAGAGTG CGCGCTGCTA AAGGTCAAAT TTGATGAAGA CGCAAGCAAA AAGGTCTCAA ACCTTGGCTT ACTAGCGCCT GGAGACTTTG CCAGTGTGAG AAGACAAGCT AAATTTATAC CTATAAAAAA TGGCGACGAC TTTTGCCATA GACTTGAGCT AGAAGTCGCA CTAAAAAATG AAGAAAAGAG CGTGAAGATA GGGTTTTAG
|
Protein sequence | MEKEIFYVDS EIYELTTLWT LRAIFNLGGE RELLRSGYDD VLDFLGIESK EPKEEEIQNL KNRLEILEKS QISCELKDLE HNLNLLQKNL GLNSTEIDIL RFVAIMYNYE VISNACSLLG DLNNIQATKA ISKILNLRFG DVQKAFRKDG IFAKTSIVKL ENNVHNLKFK IDVINNNFMC DLFVKCESMD EIFESAIKPC SKTNLTTKNY PHIKEDVKIL LSFLKNAVSK KQKGVNVLLY GSAGTGKTEL SKVIASELNL KLYEVAYDDE YGYATEDRRL RSYCLAQNVL SAGSNLLMYD EAEDIFNTNN DEKRQYGKAF INRSLETNYL PTIWITNNIL DMDEAVVRRF NLAIEIGIPT EDVRAKIIKK YSENLIDNKL VKKLAKNRFV APAVVSNASL VVSNLNTKDK NKAFERVISN TLKAQGYDEI EKDEKPSADL PSSYDPNFVN SDCDLNELIQ GIKESKSARI CLYGVPGTGK SAYTKFIAKS LKKPIIIKKG SDLLSMFVGG TEKNIALAFK EAKDKKAVLV FDEVDSFLQD RSMAARSWEV TQVNEMLVQM ESFDGIFIAT TNLIDNLDKA CLRRFDLKLE FGYLLPEQAR NLFKKECALL KVKFDEDASK KVSNLGLLAP GDFASVRRQA KFIPIKNGDD FCHRLELEVA LKNEEKSVKI GF
|
| |