| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3130 |
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| Symbol | |
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| ID | 5589797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 3137406 |
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| End bp | 3139913 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640926772 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001464145 |
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| Protein GI | 157158477 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATTC AGAATTTCGA TCATTCACAC CACAAGCTCA AAATTCGCGG CCTGCAAAGT
CCGGTGGATG TGCTGACCTT CGAAGGTCGC GAACAACTGA GTACCCCGTT CCGCTACGAC
ATTCAGTTTA CCAGTACCGA TAAAGCCATC ACGCCGGAGT TGGTGCTGAT GCAGGACGGC
GCATTCAGCC TGACGGCACC GCCGGTACAG GGGATGCCGG TACAGACTGC CCTGCGCACC
CTGCACGGCG TCATCACCGG CTTTAAACAC CTGTCATCGT CACAGGATGA AGCCCGTTAC
GAAGTGCGCC TTGAACCCCG AATGGCGCTG CTGGCCCGCA GCCGCCAGAA CGCCATTTAC
CAGAACCAGA CGGTGCCGCA AATAGTCGAA AAAATCCTGC GCGAGCGGCA CCAGATGCGC
GGTCAGGACT TCGTGTTTAA CCTCAAAAGC GAATACCCGT CCCGTGAACA GGTGATGCAG
TACGGTGAGG ACGACCTGAC GTTTATTTCA CGCCTGCTGT CGGAAGTGGG TATCTGGTTC
CGCTTTGCCA CCGACGCCCG GCTGAAAATT GAGGTTGTCG AGTTTTACGA CGACCAGAGC
GGCTATGAGC GCGGACTGAC GCTGCCGCTT CGCCATCCTT CAGGGCTGTT TGATGGTGAA
ACGGAAGCCG TATGGGGGCT GAACACCGCA TACAGCGTGG TGGAAAAAAG CGTCACCACG
CGGGACTACA ACTACCGCAC CGCCACAGCA GAGATGATGA CAGAGCAGCA TGACGCCACC
GGGGGCGATA ACACCACCTA TGGCGAAGCC TACCACTACG CTGACAACTT CCTGCAAAAA
GGCGACAAGG AGGCAGCGGA AAGCGGCGCG TTTTATGCCC GTATCCGTCA CGAACGCTAC
CTGAATGAAC AGGCCATTCT GCAGGGCCAG AGCACCAGTT CACTGCTGAT GCCGGGGCTG
GAAATCAGGG TTCAGGGCGA CGACGCGCCT GCGGTATTCC GCAAGGGCGT GCTGATTACC
GGCGTGACGG CCAGCGCGGC CCGTGACCGC AGCTATGAAC TGACGTTCAC GGCGATACCC
TACTCAGAAC GCTACGGCTA TCGCCCGGCG CTTATCCCCC GCCCCGTAAT GGCCGGAACA
CTCCCGGCGC GGGTCACCAG CACGGTGAAA AACGATATTT ATGCCCATAT AGACAAAGAC
GGGCGCTACC GGGTCAACCT CGATTTTGAC CGCGATACGT GGAAACCGGG TTATGAGAGC
CTGTGGGTAC GCCAGTCGCG CCCGTATGCG GGAGACACCT ACGGCCTGCA TCTGCCGCTG
CTGGCGGGAA CGGAAGTCAG CATCGCGTTT GAGGAAGGCA ACCCGGACCG ACCTTATATC
GCAGGCGTAA AACACGACTC GGCGCACACC GACCATGTGA CCATCCAGAA CTACAAGCGC
AACGTGCTGC GTACCCCGGC GAACAACAAA ATCCGCCTCG ATGATGAGCG CGGCAAAGAG
CATATCAAGG TCAGTACCGA GTACGGCGGC AAGAGCCAGT TGAATCTGGG TCATCTGGTG
GATGCCGGAA AACAACAGCG CGGGGAAGGC TTTGAACTGC GTACCGATAT GTGGGGCGCG
GTGCGGGCGA AGAAAGGGAT TTTTATCAGC GCCGATGCGC AGGATAAGGC GCAGGGGCAG
GTGCGCGAAA TGGCTCCGGC GATGGCAATA CTGGATGGCG CACAGTCACA GATGCAGTCG
CTGTCCACTG ATGCGCAGAC GACGAATGCC GATCCGGCAG ATCTGTCATC GCAGATAGCG
CTGTTGCAGC AAAGTGTAAA AGATCTGACG CAGGCCGTGA TCCTGCTAAG TGCACCCAAG
GGCGTGGCGA TCGCCAGCGG CGAGCACCTG CAACTGGCGG CGTCGAAGAA TGTGATAGCG
AACGCAGGCA ACAACGCAGA TATCGGCGTA GTAAAAAATA TGTTTATCGG TGTGGGTCAG
GCGCTGAGCG TGTTTGTGCG TAAAGCGGGC ATCAAGCTGT TTGCCAATAA AGGGGCGGTC
TCGGTACAGG CACAGAACGA TCTGATGGAA CTGTTGGCAC AGAAATCGAT AGAGATCACC
AGTACGGAAG ATGAGATCAA GATCACCGCG AAGAAGAAAA TCACCCTTAA CGGCGGTGGC
AGCTACATCC GGCTGGATGC CTGCGGGATA GAAGCGGGAA CGCCGGGAGA ATATAACGTT
AAGGCCGGAT ATTACGGGCG TAAACCAAAG GCGAAGCTGA CGCCGGAGCT GATGGCATTT
CCGGTGATTA AGTCTGAGGA TTTTAATCAG AGCTTTATTT TGCTGGATGA AAATACTGGG
CAACCACTTA TTAATTGGCC CTATGAACTA GAACTGGAAA GTGGGCTAAA AATGAGTGGG
ATTACTGATG AAAATGGAAA TACAGAACTA ATATCCTCTG ATAAGGAGGA GGTCGTTAAT
ATTAGTGTGT TTGAACCCGA TGAGTTTTTA GACGATGACA TTAATTAA
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| Protein sequence | MGIQNFDHSH HKLKIRGLQS PVDVLTFEGR EQLSTPFRYD IQFTSTDKAI TPELVLMQDG
AFSLTAPPVQ GMPVQTALRT LHGVITGFKH LSSSQDEARY EVRLEPRMAL LARSRQNAIY
QNQTVPQIVE KILRERHQMR GQDFVFNLKS EYPSREQVMQ YGEDDLTFIS RLLSEVGIWF
RFATDARLKI EVVEFYDDQS GYERGLTLPL RHPSGLFDGE TEAVWGLNTA YSVVEKSVTT
RDYNYRTATA EMMTEQHDAT GGDNTTYGEA YHYADNFLQK GDKEAAESGA FYARIRHERY
LNEQAILQGQ STSSLLMPGL EIRVQGDDAP AVFRKGVLIT GVTASAARDR SYELTFTAIP
YSERYGYRPA LIPRPVMAGT LPARVTSTVK NDIYAHIDKD GRYRVNLDFD RDTWKPGYES
LWVRQSRPYA GDTYGLHLPL LAGTEVSIAF EEGNPDRPYI AGVKHDSAHT DHVTIQNYKR
NVLRTPANNK IRLDDERGKE HIKVSTEYGG KSQLNLGHLV DAGKQQRGEG FELRTDMWGA
VRAKKGIFIS ADAQDKAQGQ VREMAPAMAI LDGAQSQMQS LSTDAQTTNA DPADLSSQIA
LLQQSVKDLT QAVILLSAPK GVAIASGEHL QLAASKNVIA NAGNNADIGV VKNMFIGVGQ
ALSVFVRKAG IKLFANKGAV SVQAQNDLME LLAQKSIEIT STEDEIKITA KKKITLNGGG
SYIRLDACGI EAGTPGEYNV KAGYYGRKPK AKLTPELMAF PVIKSEDFNQ SFILLDENTG
QPLINWPYEL ELESGLKMSG ITDENGNTEL ISSDKEEVVN ISVFEPDEFL DDDIN
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