| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2225 |
|---|
| Symbol | |
|---|
| ID | 5587059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 2187783 |
|---|
| End bp | 2189093 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640925893 |
|---|
| Product | S49 family peptidase |
|---|
| Protein accession | YP_001463293 |
|---|
| Protein GI | 157157447 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0230467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTGGA ACAATTTTCC GCACCTCGCC GCTAGGGCGT TCAATCAACC GCTTTTGCTG
GAGCCCGCCT ACGCGCGGGT ATTTTTTTCT GCGCTGAGCG ACCGGTTCGG TACCGGGCGA
CTGATTGATA CAGCGTCAGG AGAGGTAATG AACAGCGACG AAATGAACGC GCTCGCGATG
GGGTGGGACA GCAGCGAGCG AACACGCCAG AAATCGTATC GCGTGGAGCG TGGTATAGCC
GTTCTGCCGG TTACCGGGAC GCTGGTTCAT AAATTGGGTT ATATCAATCC GGTCAGCGGG
ATGAGTGGTT ACGACGGAAT CGCAAAACGC CTGCAGCAGG CGATTTCTGA TCCCGATGTT
AAGGGGATCC TGCTGGATAT TGATTCCCCT GGCGGTGAGG TCGCCGGCGC GTTTGATACC
GCTGATTTAA TCGCCCGGGC GCGAGAGCAA AAACCGGTGT GGGCGCTGGC CAGCGATACG
GCCTGCAGCG CCGCATATTT GCTGGCGTCA GCGTGTTCGC GCCGGCTGAT AACGCAGACC
GGCACGGTTG GTTCAATCGG TGTCCTGATG GCTCACCGCT GCGTCGAAAA GGCGCTGGAG
ATTGCCGGCG TTGACGTGAC GCTGATTTAC GCCGGCGCGC ACAAAGTCGA CGGGAACCCG
TATTCCCAGC TGCCCGACGA CGTTCGCGAC GAATTCCAGC TGAGTATTAA CAGCACACGC
GAGCAGTTCG CGCAAAAAGT CTCGGATTAT ACCGGGCTGA AAAAATCCAG GGTGCTGGCC
ACAGAGGCCG CAGTATTTAT CGGCGCGGAC GCGATTAAAT CTGGTCTCGC TGATCAACTC
GTTAATTACG CGGACGCTAT CGCAGTGATG GCCGACGCAC TGAAACCAAA AACGGAGCGA
TTTATGCCAG GTACAACAGA AACCACGGCG GAGACCACGA CCACAGAACA AACCGCGGCT
ACGACTACGG TCGCGCCGGT TGAGTCCAAC GCGGAGCAGA TTCGCGCGGA CGCCGCATCG
AGCGAACTGG CACGCGTGAT GGCCATCATC AACTGTCCCG AAGCTGTTGG GCGCGAGGCG
CAGGCAAAAG CGCTCGCTGC CGTCCCCGGG ATGACGGTCG GGCAGGCGCA GGCTGTCCTC
GCGGCAGCAC CGCAAACAGC GCAGGCGCGG ACAGAAACGG CGCTCGATAC ACTCATGAGC
ACTGAATCAC CGGAAACTAT TCAGGATGCC GGCAGCACCA CGGCAACAGG AACAACCGCA
AACGTCTCGA TGCTGGTCGC GGCAGGGCGT TCAATTTTAG GGGATGAATA A
|
|---|
| Protein sequence | MPWNNFPHLA ARAFNQPLLL EPAYARVFFS ALSDRFGTGR LIDTASGEVM NSDEMNALAM
GWDSSERTRQ KSYRVERGIA VLPVTGTLVH KLGYINPVSG MSGYDGIAKR LQQAISDPDV
KGILLDIDSP GGEVAGAFDT ADLIARAREQ KPVWALASDT ACSAAYLLAS ACSRRLITQT
GTVGSIGVLM AHRCVEKALE IAGVDVTLIY AGAHKVDGNP YSQLPDDVRD EFQLSINSTR
EQFAQKVSDY TGLKKSRVLA TEAAVFIGAD AIKSGLADQL VNYADAIAVM ADALKPKTER
FMPGTTETTA ETTTTEQTAA TTTVAPVESN AEQIRADAAS SELARVMAII NCPEAVGREA
QAKALAAVPG MTVGQAQAVL AAAPQTAQAR TETALDTLMS TESPETIQDA GSTTATGTTA
NVSMLVAAGR SILGDE
|
|---|
| |