| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1705 |
|---|
| Symbol | |
|---|
| ID | 5587019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 1707135 |
|---|
| End bp | 1708331 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640925386 |
|---|
| Product | replication initiation factor family protein |
|---|
| Protein accession | YP_001462791 |
|---|
| Protein GI | 157155532 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2946] Putative phage replication protein RstA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGG TTCAGGAAAC CATACGTCAC GTCTTCATAG ACCATCTTGC ATTCACTTTC
CCCATGAGTG AGCTGAAGAA TCTTGAGACT TTCGACGGCG CTATTCAGTT CTGGCGTAAG
TATGGTTCCA TGCCGCGTCT GCGTGATTTT CTGCCCGGTC GTGATGCCTT CTTTCGTGAT
GTGGTTGATC CTGAGACTCG ATGCTGGGTT CCTGATGATG CGGAGTCAGA TAAAATTTGT
AGCGGCATTT CTGGTGATAG AGCGTTTATT GAACAGCATA TTGAACAATA TAATCAGGCT
GTTCAGGCTG CGTATTTGCA TCGTCTTAAA ATCTGGTTAT CCAGTGCTTT TGGTTTGAGT
ATGGGACCGG AGCGGGATCG TGGTGGCTTT AATTATCGCT GTTCTGCGCC ATTATTTTCT
GACGATGGCG GTAATAATTT ACATGGCTTT GTGTTCTGGG GTGGAAACAA TAACACGGTA
TATATACAGA TTTCCGGTCT GGGATGTGCT CATGTATTTA GTGGCACTGA GCCTCAGGAT
GTATTCAAAT GGTTGAAACA TCTCAATATT ACGACACTTA AGCGTATTGA TTTGGCTGTT
GATGATTTCG ATGGTGTTTT TACGTGTGAC GCTGCTGTTC GCGATCATCG CTCTGGCGCG
TTTTATAGTG GTAAGGGACC GCGTCCGGGT TTTTCGAACT CCTGTAAATG GGATGGTCGC
GCAGTATTAA AGCAGGAGAT GTACACGTTT GGTTCCCGGC AATCGCGTGT TTACTGGCGT
ATCTATAATA AAGCGCTTGA ACAAAAAGTC AGTGGTACGT GGAATCGTTC TGAGGTCGAG
CTTAAAGGGG TTCCTGTTGA TGTACTGCTT GATATTGCCG GTTATTTTAC GGGATTGTGT
GATTATGCAG CACAAATCAA TCCAGCTAAA CCACGCAAGT TTAATCCTTA TCGTCCTGAT
TTAGCGGACG AAAAAAAGGC AATTAATGCA CTGGAACATA ATGTTCACTG GTTACGTAAG
CAGTGCTCTA AATCTGTTGC AAAGCTATTT CATCTTCTCG GTAATGATTA CGAGGCGGTC
TTTACTGCTA TTGTCAGACA TGAGGATATA CAGGATGAGA AGATTAGATT TTCAATACCG
GATGTTTATC GGCAGGTAAT TGCAGGTAAA TTCTATAATC GTTCAGTTCC ATTTTAA
|
|---|
| Protein sequence | MKPVQETIRH VFIDHLAFTF PMSELKNLET FDGAIQFWRK YGSMPRLRDF LPGRDAFFRD
VVDPETRCWV PDDAESDKIC SGISGDRAFI EQHIEQYNQA VQAAYLHRLK IWLSSAFGLS
MGPERDRGGF NYRCSAPLFS DDGGNNLHGF VFWGGNNNTV YIQISGLGCA HVFSGTEPQD
VFKWLKHLNI TTLKRIDLAV DDFDGVFTCD AAVRDHRSGA FYSGKGPRPG FSNSCKWDGR
AVLKQEMYTF GSRQSRVYWR IYNKALEQKV SGTWNRSEVE LKGVPVDVLL DIAGYFTGLC
DYAAQINPAK PRKFNPYRPD LADEKKAINA LEHNVHWLRK QCSKSVAKLF HLLGNDYEAV
FTAIVRHEDI QDEKIRFSIP DVYRQVIAGK FYNRSVPF
|
|---|
| |