Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4588 |
Symbol | |
ID | 5594712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4598249 |
End bp | 4599163 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640923682 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001461122 |
Protein GI | 157163804 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.0111932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTT CACAAAATTT ACGCCACAAT GTGATTAACC AGGTCATTGA TGATATGGCG CGGGGTCATA TCCCTTCCCC ACTTCCATCG CAAAGTGCGC TGGCGGAAAT GTACAACATC AGCCGCACAA CAGTGCGTCA TATTCTCAGC CACTTACGCG AATGCGGCGT CTTAACGCAG GTTGGAAACG ACTATGTTAT TGCGCGTAAA CCTGACCATG ATGACGCTTT CGCCTGTACT ACCGCTTCAA TGAGTGAACA AAACAAAGTG TTTGAGCAGG CTTTTTTCAC GATGATAAAC CAGCGTCAGT TACGCCCTGG GGAAACTTTT TCTGAACTGC AACTGGCTCG GGCCGCGGGT GTCAGCCCGG TGGTTGTAAG AGAATATCTT TTAAAATTAG GCCGTTATAA TCTTATTCAA AGCGAAAAAC GCGGCCAGTG GAGCATGAAG CAATTCGATC AATCCTACGC CGAGCAGCTG TTTGAGCTAC GCGAAATGCT CGAAACACAT TCACTTCAGC ACTTTCTCAA CCTGCCTGAT CATGATCCCC GCTGGCTGCA GGCGAAAACC ATGCTCGAAC GTCATCGGCT ACTGCGTGAC AACATCGGCA ATAGCTTTCG CATGTTCTCG CAACTTGACA GAGATTTTCA CTCCTTACTG CTTTCAGCTG CCGACAATAT CTTTTTTGAT CAATCGCTTG AGATCATCTC AGTCATCTTT CATTTTCACT ATCAATGGGA CGAAAGCGAT CTTAAACAGC GCAATATCAT TGCCGTCGAT GAGCATATGA CCATTCTCAG CGCTCTGATT TGCCGCAGTG ACCTTGATGC CACCCTTGCG CTCCGTAACC ATTTGAATTC AGCTAAACAA TCAATGATTC GATCCATTAA TGAGAACACG CGTTATGCTC ATTAA
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Protein sequence | MSRSQNLRHN VINQVIDDMA RGHIPSPLPS QSALAEMYNI SRTTVRHILS HLRECGVLTQ VGNDYVIARK PDHDDAFACT TASMSEQNKV FEQAFFTMIN QRQLRPGETF SELQLARAAG VSPVVVREYL LKLGRYNLIQ SEKRGQWSMK QFDQSYAEQL FELREMLETH SLQHFLNLPD HDPRWLQAKT MLERHRLLRD NIGNSFRMFS QLDRDFHSLL LSAADNIFFD QSLEIISVIF HFHYQWDESD LKQRNIIAVD EHMTILSALI CRSDLDATLA LRNHLNSAKQ SMIRSINENT RYAH
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