Gene EcHS_A4527 details

Gene Information

• Locus tag: EcHS_A4527
• ID: 5592199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 4532707
• End bp: 4534656
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640923623
• Product: phage integrase family site specific recombinase
• Protein accession: YP_001461063
• Protein GI: 157163745

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.259982
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCAGC GTTATAACCT CTATCGTCGA ACCAGCGGCA TTTATGTTGT CCGCATTAGC 
GTTCCCCAAC GTTTTCGTCG ATACGCAGGA CAGTGTGAGA TTCACACTTC AACAGGCACT 
CATGATCTTC ATGAAGCAAA GCAGAAGTCC GCGCTCCTGT TGGCTGTCTG GTATCAGACC 
TTACAAGAGT ATGAACAATT GGATTACCGA ACTTTAAGTG ACTGCGCCCC GCTGCTTGCT 
GGTGAGGGGA TGATCTCGCT TTCTAACTTT GCTCAGTCAA TCGAGTTGCC TATATCGCAA 
TTGATTCGAG AGGTGATTAA TCGTAACCTC CCGGTATTCT GGCTGGCGAC TGGTCAGTTC 
GGTTTCTATG TTGATGAATT TAATGCAGTA GAGCGGGAAC CCGGTGCAAA ACGAGAAAAA 
CAGTCTGATG ATGAAAAGGA TCAACCTAAA GAAGTCATCA TTCTCAATAG CGCGTTTGAG 
CTGGGTATCG AGAGCTTCGC AAATGGTTAT CTCCGCCCCT TCAATCCCCG GCATACTTTA 
GATTGTCTGT TGAGCGCTGG AGTATCCGAA GGAGAGGCTG CATTTCGAAC TAGTGGTGAT 
AACCAAAGTG GAGGTTGGTT CTTCGATTTA CCCGGCGTAG ATATAACTGC TGATAGCCTC 
TTGATTAGCA AAGTTCATGC TGAAGGCCTT CGACTTACAT GGCTGGTTAA GACCACGCCA 
CCAGCAGTTA GCATTCACCC TGCCGTGCCT CTTGTCGCCC CTGTTATCGC TAACGAATAT 
GTTCACCGCA AACATTACAA TGAAAACTTG TCATGGCTTC GTGAAGAGTA TTTGAAACAT 
CGGCGTAAGG GCAAGGTATC AGAAGCGGCG CTCCGCGATA TTCGCTATTA CTTCGATTTG 
ATGATCGAAG TGATGGGGGA TATTCAGTTG GAAGATTTCG ACCGTGATTT CCTCCGGGCT 
TATGAGAGCA AGTTGCGCAC AATTCCTGCT AACCGTAATT TGATGAAAGG TAAGCACGGG 
GTTAAGACGC TGGATGAGTT AATCGCCAAA GCGGCAGAAT GTGGCGATAA ACTGATGACA 
GAAGAGTCTG TCAAAAAGTA TATCAACGGC CTTTATGGTG CAATGGAGTG GGCTGTTGAT 
GACGGTAAGT TTCTGAAATC GCCATGCGAC AACTTTTTCC CTCCCGATGA CAAAGGTGAG 
CGAGAGCAGG ATCACACTGA CATATTTGAA CCGCATGAAA TTAAGGCAAT TTTTTCGCAA 
CCGTGGTTTG TGGCTGGAAC TGTTGAACGT AATGCGCAAG GGCGATTCCA TCAATATTGC 
CCGTTTCACT ATTGGGCGCC GTTGTTGGGC TTGATGACGG GGGCAAGGGT TAACGAGATT 
GCACAGTTAA TGCTGGACGA TGTTCTGGCA GATGACGGCG TTTATTACCT GAACCTTGAA 
AGCGATAGCG AAAACGGAAA GAAACTAAAA AACGCCCAAT CCCGCCGCAA GATTCCGGTT 
CATTCTACGC TGATTGAACT CGGTTTTATC GAGTATGTGG ATGCGTTGAA AGCTGCCGGG 
TATGACCGTC TTTTTCCCGA GCTTAAACCA CATAAAACTA AAGGCTATGG TAGGCCGGTT 
TCCGCATGGT TCAATGAATC ATTGCTTGCG GGTCGATTAA AACTTGAAAG AGACAGAAGC 
AAATCTTTCC ACTCTTTCCG GCATTCTGTT TCAACTTTGC TTAAAGAGAA GGGTGTTAGT 
TCGGAACTGC GTGGGCAGCT ACTTGGGCAT GTGCGCGGCA AAACAGAAAC TGAAGTGCGA 
TACAGCAAAG ATTTAAAACC GGTTCACATG GTTGAGGTTG TCGAAAAGAT TGATTTTTCT 
TTGCCCGAGA TAGCGAGATT CAACATTCCT GATGGGCTGG ATGCTGTAAG TGATGCGCTG 
CGAAGAAAGC GTGGCAAACA AACAGGTTGA 

 

Protein sequence

MSQRYNLYRR TSGIYVVRIS VPQRFRRYAG QCEIHTSTGT HDLHEAKQKS ALLLAVWYQT 
LQEYEQLDYR TLSDCAPLLA GEGMISLSNF AQSIELPISQ LIREVINRNL PVFWLATGQF 
GFYVDEFNAV EREPGAKREK QSDDEKDQPK EVIILNSAFE LGIESFANGY LRPFNPRHTL 
DCLLSAGVSE GEAAFRTSGD NQSGGWFFDL PGVDITADSL LISKVHAEGL RLTWLVKTTP 
PAVSIHPAVP LVAPVIANEY VHRKHYNENL SWLREEYLKH RRKGKVSEAA LRDIRYYFDL 
MIEVMGDIQL EDFDRDFLRA YESKLRTIPA NRNLMKGKHG VKTLDELIAK AAECGDKLMT 
EESVKKYING LYGAMEWAVD DGKFLKSPCD NFFPPDDKGE REQDHTDIFE PHEIKAIFSQ 
PWFVAGTVER NAQGRFHQYC PFHYWAPLLG LMTGARVNEI AQLMLDDVLA DDGVYYLNLE 
SDSENGKKLK NAQSRRKIPV HSTLIELGFI EYVDALKAAG YDRLFPELKP HKTKGYGRPV 
SAWFNESLLA GRLKLERDRS KSFHSFRHSV STLLKEKGVS SELRGQLLGH VRGKTETEVR 
YSKDLKPVHM VEVVEKIDFS LPEIARFNIP DGLDAVSDAL RRKRGKQTG