| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4319 |
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| Symbol | nrfE |
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| ID | 5595073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 4323278 |
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| End bp | 4324936 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640923417 |
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| Product | heme lyase subunit NrfE |
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| Protein accession | YP_001460862 |
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| Protein GI | 157163544 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 71 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGACCC CGTTGACGGC CTTTGCGGGA GTGCGGTTGC GCTGGCCTGC CATGATGCGA
CTCACTTGCA TCGGCATTCT GGCGCAGTTC GCGCTCCTGC TGCTCGCCTT TGGCGTACTG
ACGTATTGTT TTCTCATCAG CGATTTCTCG GTCATTTATG TCGCCCAACA TAGCTACAGC
CTGCTGTCGT GGGAACTCAA ACTGGCGGCG GTGTGGGGCG GCCATGAAGG TTCGCTGCTG
CTTTGGGTGC TGCTGCTTTC CGCCTGGAGC GCGCTGTTTG CCTGGCATTA TCGGCAGCAA
ACCGATCCGC TATTTCCGCT GACGCTAGCC GTTTTATCTC TCATGCTCGC CGCACTGCTA
CTGTTTGTAG TGCTGTGGTC CGATCCCTTC GTGCGGATAT TTCCACCAGC AATCGAAGGC
CGCGATCTCA ATCCGATGCT GCAACATCCC GGTCTTATCT TTCATCCACC GCTGCTTTAC
CTTGGCTATG GCGGTTTGAT GGTAGCGGCG AGCGTGGCGC TGGCGAGTTT ACTGCGCGGC
GAGTTTGATG GTGCCTGCGC CAGAATTTGT TGGCGCTGGG CACTACCTGG CTGGAGCGCA
TTAACGGCGG GGATCATCCT CGGTTCTTGG TGGGCCTATT GCGAACTGGG CTGGGGCGGC
TGGTGGTTCT GGGATCCGGT GGAAAACGCC TCTTTATTAC CCTGGCTTTC TGCCACTGCG
CTGCTGCACA GTTTGTCCCT GACACGCCAG CGGGAGATTT TCCGCCACTG GTCGCTGTTG
CTGGCGATAG TAACTCTGAT GCTGTCGCTA CTGGGTACCT TAATTGTCCG TTCTGGCATT
CTGGTTTCGG TTCATGCGTT CGCACTGGAT AACGTCCGCG CCGTGCCGTT GTTCAGCCTG
TTTGCACTGA TTAGCCTTGC GTCTCTGGCT CTGTATGGCT GGCGAGCGCG GGACGGTGGT
GCGGTGGTGC GTTTTTCGGG GTTATCGCGG GAAATGTTAA TCCTCGCTAC GCTGTTGCTG
TTTTGCGCAG TGCTACTGAT CGTGCTGGTG GGAACGCTTT ATCCGATGAT TTACGGCCTG
CTGGGCTGGG GACGCCTCTC CGTTGGCGCG CCGTATTTTA ACCGCGCGAC GTTACCGTTT
GGCCTGTTGA TGCTGGTGGT GATTGTGCTG GCGACGTTTG TCTCTGGCAA ACGCGTGCAG
CTTCCGGCGC TGGTAGCTCA TGCGGGCGTG CTGTTATTTG CCGCGGGGAT CGTGGTTTCC
AGCGTCAGCC GTCAGGAGAT CAGCCTGAAT TTACAGCCGG GTCAGCAGGT GACGCTGGCA
GGATACACCT TCCGTTTTGA GCGCCTCGAT CTGCAAGCCA AAGGCAATTA CACCAGCGAA
AAAGCGATAG TGGCACTGTT TGACCATCAG CAACGCATTG GTGAACTGAT GCCGGAGCGG
CGTTTTTACG AAGCACGTCG TCAGCAAATG ATGGAACCGT CAATTCGCTG GAACGGCATC
CATGACTGGT ATGCGGTCAT GGGTGAAAAA ACCGGAGCGG ATCGTTACGC TTTTCGCTTG
TATGTACAAA GCGGTGTGCG CTGGATCTGG GGGGGAGGAT TGTTGATGAT TGCGGGCGCA
TTGTTAAGCG GATGGCGGGG GAGGAAGCGC GATGAATAA
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| Protein sequence | MLTPLTAFAG VRLRWPAMMR LTCIGILAQF ALLLLAFGVL TYCFLISDFS VIYVAQHSYS
LLSWELKLAA VWGGHEGSLL LWVLLLSAWS ALFAWHYRQQ TDPLFPLTLA VLSLMLAALL
LFVVLWSDPF VRIFPPAIEG RDLNPMLQHP GLIFHPPLLY LGYGGLMVAA SVALASLLRG
EFDGACARIC WRWALPGWSA LTAGIILGSW WAYCELGWGG WWFWDPVENA SLLPWLSATA
LLHSLSLTRQ REIFRHWSLL LAIVTLMLSL LGTLIVRSGI LVSVHAFALD NVRAVPLFSL
FALISLASLA LYGWRARDGG AVVRFSGLSR EMLILATLLL FCAVLLIVLV GTLYPMIYGL
LGWGRLSVGA PYFNRATLPF GLLMLVVIVL ATFVSGKRVQ LPALVAHAGV LLFAAGIVVS
SVSRQEISLN LQPGQQVTLA GYTFRFERLD LQAKGNYTSE KAIVALFDHQ QRIGELMPER
RFYEARRQQM MEPSIRWNGI HDWYAVMGEK TGADRYAFRL YVQSGVRWIW GGGLLMIAGA
LLSGWRGRKR DE
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