Gene EcHS_A3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3345 
Symbol 
ID5591985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3349900 
End bp3350418 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content50% 
IMG OID640922463 
ProductPfpI family intracellular peptidase 
Protein accessionYP_001459956 
Protein GI157162638 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA AAATTGCCGT TTTAATCACT GATGAATTTG AGGATTCAGA ATTTACTTCA 
CCCGCAGACG AGTTCCGTAA AGCCGGACAC GAAGTGATTA CCATTGAAAA ACAAGCGGGT
AAAACGGTGA AAGGCAAAAA AGGAGAAGCC AGCGTGACCA TCGATAAATC CATCGATGAA
GTGACGCCTG CGGAGTTTGA TGCCCTGCTG CTACCGGGCG GCCATTCACC GGATTATCTG
CGTGGGGACA ACCGTTTTGT CACCTTTACC CGTGATTTTG TGAATAGTGG CAAACCGGTG
TTTGCCATCT GTCACGGCCC GCAGTTGCTG ATCAGCGCCG ATGTGATTCG GGGGCGCAAA
CTGACCGCAG TTAAACCGAT CATTATTGAT GTTAAAAATG CGGGCGCGGA ATTTTACGAT
CAGGAAGTCG TGGTTGATAA AGATCAGCTG GTTACCAGCC GGACACCGGA CGATCTGCCA
GCGTTTAACC GCGAGGCGTT ACGCCTGCTC GGTGCCTGA
 
Protein sequence
MSKKIAVLIT DEFEDSEFTS PADEFRKAGH EVITIEKQAG KTVKGKKGEA SVTIDKSIDE 
VTPAEFDALL LPGGHSPDYL RGDNRFVTFT RDFVNSGKPV FAICHGPQLL ISADVIRGRK
LTAVKPIIID VKNAGAEFYD QEVVVDKDQL VTSRTPDDLP AFNREALRLL GA