| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3343 |
|---|
| Symbol | |
|---|
| ID | 5591983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3348024 |
|---|
| End bp | 3349064 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640922461 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_001459954 |
|---|
| Protein GI | 157162636 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGTC AGTCTTCATC TCAGGCGGCA ACGCCCATTC AGTGGTGGAA ACCCGCGCTT
TTCTTTCTCG TTGTCATTGC CGGTCTCTGG TATGTGAAAT GGGAACCTTA CTACGGCAAA
GCGTTTACTG CTGCCGAAAC CCACAGTATC GGTAAATCTA TCCTTGCGCA GGCGGATGCT
AACCCATGGC AGGCGGCGTT GGATTACGCG ATGATCTATT TCCTCGCGGT ATGGAAAGCG
GCGGTGCTGG GGGTGATCCT CGGTTCGTTG ATTCAGGTGC TGATCCCGCG TGACTGGTTG
TTGCGTACGC TTGGGCAATC GCGCTTTCGC GGCACGCTGC TGGGAACGCT GTTTTCGTTG
CCGGGCATGA TGTGTACCTG CTGTGCGGCT CCGGTCGCGG CGGGAATGCG TCGCCAACAG
GTGTCGATGG GCGGTGCGCT GGCATTCTGG ATGGGCAATC CGGTGTTAAA CCCGGCGACG
CTGGTGTTTA TGGGCTTTGT CCTCGGCTGG GGTTTTGCGG CGATTCGTCT GGTGGCCGGG
CTGGTGATGG TGTTGCTGAT TGCGACGCTG GTGCAAAAAT GGGTGCGTGA AACACCGCAA
ACGCAGGCAC CGGTCGAAAT TGACATACCG GAAGCACAGG GCGGGTTTTT TAGCCGCTGG
GGCAGGGCGC TATGGACGCT TTTCTGGAGT ACGATCCCGG TTTACATCCT TGCAGTACTG
GTGTTGGGTG CCGCTCGCGT CTGGTTATTC CCCCATGCCG ATGGTGCTGT CGATAACAGC
CTGATGTGGG TGGTGGCGAT GGCGGTAGCA GGATGCTTGT TTGTCATTCC CACGGCAGCA
GAAATTCCGA TTGTACAAAC GATGATGCTG GCAGGTATGG GAACCGCTCC GGCGCTGGCA
TTGTTGATGA CGCTCCCGGC GGTGAGTTTG CCGTCACTGA TTATGCTGCG CAAAGCGTTC
CCGGCGAAAG CCTTATGGCT GATGGGGGCG ATGGTGGCAG TGTCTGGTGT GATTGTCGGC
GGGCTGGCGC TGTTGTTCTG A
|
|---|
| Protein sequence | MTGQSSSQAA TPIQWWKPAL FFLVVIAGLW YVKWEPYYGK AFTAAETHSI GKSILAQADA
NPWQAALDYA MIYFLAVWKA AVLGVILGSL IQVLIPRDWL LRTLGQSRFR GTLLGTLFSL
PGMMCTCCAA PVAAGMRRQQ VSMGGALAFW MGNPVLNPAT LVFMGFVLGW GFAAIRLVAG
LVMVLLIATL VQKWVRETPQ TQAPVEIDIP EAQGGFFSRW GRALWTLFWS TIPVYILAVL
VLGAARVWLF PHADGAVDNS LMWVVAMAVA GCLFVIPTAA EIPIVQTMML AGMGTAPALA
LLMTLPAVSL PSLIMLRKAF PAKALWLMGA MVAVSGVIVG GLALLF
|
|---|
| |