| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2793 |
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| Symbol | |
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| ID | 5595421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 2803842 |
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| End bp | 2806094 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640921909 |
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| Product | alpha amylase family protein |
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| Protein accession | YP_001459426 |
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| Protein GI | 157162108 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00275664 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTA TAAAACCAGG ACCCAGAAAT TTACCTATCG ACAACCCCAC ATTGTTATCA
TGGAACATTA CTGACGGGGA TCTAAATTCC AAATTAAATA CATTAGAATA TCTAAACTGT
ATAACAAACA TTATTAATTC TTGTGGAGTT TACCCTCAAG GATTAAAAGA CAGAGAAATT
ATATCAACTT TTCACGCAGA AAAAGTTATT AATGATCTGT TAAAAAACGA TTATAAAATT
TCCCTTTCTC CAGATACAAC TTATCGAGAG TTGAATAAAG CAGCACAGCG TAGCATTACA
GCGCCAGACA GGATAGGAGA AGGAAAAACA TGGGTTTATC AACGAGATAC AATAATTGAA
AGAGGTGATA ACAGCGGTGT TTATCAGTAT GGTCCTGCTG AACACTTCAC CCACATTATA
TCTGACAAAC CTTCCCCAAA AGATAAATAT GTTGCATATG CTATTAACAT TCCTGACTAT
GAGCTGGCAG CCGATGTATA TAATATTAAC GTGACGTCAC CTTCCGGACA GCAAGAAACA
TTTAAAATAT TAATCAATCC AGAACATCTA CGGCAAACAC TTGAGCGTAA ATCTCTTACT
GCTGTTCAGA AATCACAATG TGAAATCATC ACCCCCAAAA AACCTGGCGA AGCGATTCTT
CATGCTTTTA ATGCCACCTA CCAGCAGATC AGAGAAAATA TGTCTGAATT TGCACGTTGC
CATTATGGGT ATATACAAAT CCCTCCAGTG ACAACTTTCC GTGCCGACGG ACCAGAAACT
CCCGAAGAAG AAAAAGGTTA CTGGTTTCAC GCTTATCAAC CCGAAGATCT TTGTACCATC
CACAATCCAA TGGGAGATTT GCAGGATTTT ATCGCATTGG TTAAAGATGC TAAAAAATTT
GGTATCGATA TCATTCCTGA TTATACCTTT AACTTTATGG GAATCGGGGG TAGTGGTAAA
AATGACCTGG ATTATCCCTC TGCTGATATA CGAGCGAAGA TCAGTAAAGA TATAGAAAGT
GGTATCCCTG GCTATTGGCA AGGTCAGGTT TTGATTCCAT TTACTATAGA TCCAGTAACA
AAAGAACGTA AACAAATCCA TCCAGAAGAT ATACATCTCA CTGCAAAAGA CTTCGAAGCA
AGTAAAGATA ACATCTCTAA GGATGAATGG GAAAACCTCC ATGCATTAAA AGAAAAGCGT
TTAAATGGAA TGCCTAAAAC AACACCCAAA AGTGACCAGG TTATTATGTT GCAAAATCAA
TACGTTCGTG AAATGCGAAA ATATGGCGTA CGAGGTTTAC GTTATGATGC GGCAAAACAC
TCAAAACATG AACAAATAGA AAGATCAATA ACCCCACCGC TTAAAAATTA TAATGAGCGG
TTACACAATA CTAACTTATT TAACCCAAAA TATCATAAAA AAGCCGTTAT GAATTACATG
GAATATCTGG TAACTTGTCA GTTGGATGAA CAACAAATGT CATCACTGCT TTATGAAAGA
GATGATTTAA GCGCCATTGA TTTTTCATTG CTCATGAAAA CGATAAAAGC CTTTTCATTT
GGTGGAGATC TCCAAACCCT TGCATCAAAA CCGGGTTCCA CAATCTCAAG CATCCCATCA
AAAAGACGGA TATTGATTAA CATTAACCAC GATTTTCCTA ACAATGGCAA TCTTTTCAAT
GACTTTCTAT TTAACCATCA ACAAGATGAA CAATTAGCAA TGGCATATAT GGCCGCTCTC
CCGTTCAGCA GGCCTTTAGT TTACTGGGAT GGCCAAGTAT TAAAATCAAC GACTGAAATT
AAAAATTATG ATGGGTCGAC GCGTGTTGGC GATGAGGCGT GGCTTAATAA AGGTTGCTCT
ACCTATCAGC AGCTCTACAA TGAATTCCAC GCATTATATA TAGATAAAGC AGGAATATGG
AGCGCATTTG AGGGTGTATT TGCAACTAAA AACGTTCTGG CCTTTAGTCG TGGGGATTCT
GTGAACATTA ATCACTCTCC TCATGATGGA CTAGTTATAA TAAATAAAGG AAACGAAGAA
GTTGAAGGTA CCTGGCCTAA CAAATTGCAA CCTGGAATAT ACAAAAACAT GGGGAGTAAT
AGCGTTAACA TTATTATTAA TAATACCCGA AAAATTATCC CCCCTGGTAA AGTATTTACG
CTTAGAGGCG GAACTCTAAA TATCAATATT CCTGGGCGTA GCGCTCTTCT TTTAGGGAAA
ACAGGAGAAC CGCCGAACTA TCTCTATTTA TAA
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| Protein sequence | MFSIKPGPRN LPIDNPTLLS WNITDGDLNS KLNTLEYLNC ITNIINSCGV YPQGLKDREI
ISTFHAEKVI NDLLKNDYKI SLSPDTTYRE LNKAAQRSIT APDRIGEGKT WVYQRDTIIE
RGDNSGVYQY GPAEHFTHII SDKPSPKDKY VAYAINIPDY ELAADVYNIN VTSPSGQQET
FKILINPEHL RQTLERKSLT AVQKSQCEII TPKKPGEAIL HAFNATYQQI RENMSEFARC
HYGYIQIPPV TTFRADGPET PEEEKGYWFH AYQPEDLCTI HNPMGDLQDF IALVKDAKKF
GIDIIPDYTF NFMGIGGSGK NDLDYPSADI RAKISKDIES GIPGYWQGQV LIPFTIDPVT
KERKQIHPED IHLTAKDFEA SKDNISKDEW ENLHALKEKR LNGMPKTTPK SDQVIMLQNQ
YVREMRKYGV RGLRYDAAKH SKHEQIERSI TPPLKNYNER LHNTNLFNPK YHKKAVMNYM
EYLVTCQLDE QQMSSLLYER DDLSAIDFSL LMKTIKAFSF GGDLQTLASK PGSTISSIPS
KRRILININH DFPNNGNLFN DFLFNHQQDE QLAMAYMAAL PFSRPLVYWD GQVLKSTTEI
KNYDGSTRVG DEAWLNKGCS TYQQLYNEFH ALYIDKAGIW SAFEGVFATK NVLAFSRGDS
VNINHSPHDG LVIINKGNEE VEGTWPNKLQ PGIYKNMGSN SVNIIINNTR KIIPPGKVFT
LRGGTLNINI PGRSALLLGK TGEPPNYLYL
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