| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2646 |
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| Symbol | trbL |
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| ID | 5591974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 2658945 |
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| End bp | 2660336 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640921761 |
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| Product | P-type conjugative transfer protein TrbL |
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| Protein accession | YP_001459288 |
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| Protein GI | 157161970 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.740918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAG TAAGTAAGCT CACCTTTTTA GGTATCATTC TTTTCTTTTC TATAAATGCC
TATGCTGGTC AATTAGATAG TAGCGGGCTA CTTGATACTT TATTAGATAA GTTTCAACAA
GTAGCCAGTA CATGGACAAC AGTAATTGCT GACTATGCAA ATTGGCTCTT CTGGGGGCTG
GTATTAATAA GTATGGTTTG GACATTTGGT ATGATGGCGA TGCAAGGGGA AGGGTTGACA
GGCGTACTTG CTGAAATAGT TCGCTTTTTT GCTGTCATTG GTTTTTTTTA TTATCTTTTA
ATCAACGGCC CATCCATATC GCAATCCATC ATTAATTCAA TGAGACAACT TGCAGCAAAC
GCGTTAGGAA TAAGTACTGG TATTTCGCCC TCAAGCATAG TTGATATGGC GTTTGCGATA
TTAACAAAGG TCAGTTCAGC CGCATCAATT TGGTCGCCAA TGATATCCAC CATTATGATA
ACAGTCGCGA TAATCGTTTT GGTAGTAATG TCCCTTATAG CGATAAATAT GCTAATCATG
TTGGTTTCTG CATGGGTACT ATGTTATGCA GGAGTTATAT TGCTTGGGTT TGGTGGTTCG
AAATGGACCT CTGACATAGC AATTAATTAC TTACGAACTG TTTTATCGGT TGGCATTCAA
TTATTCACGA TGACATTAAT TATTGGGATT GGACAATCAT TTATAGATCA ATATTTTTCT
CTTATTAAAG ATGATGTTCC TGATCTTAAT AGTCTTATCG TTTTGCTTCT GGCGTCAATT
ATCCTGTTAG TGTTAACGAA TAAGCTACCA CTGTTGTTAT CAGGTGTTGT AGGAGGGGCT
TCTTTACAAG GGATTGGTGG ATTTGGGGCG GGTATGATTA CCGGCGCTGC CGCTACTGCC
ATCAGCGGTG CTGGAGCGAT GGCAATGGGG GCATCAGCTC AAGTCAGCGG CGGAGCCTCT
GCATTGAAGG CAGCGTTCGA GTCTGCGCAA GCTGCCATGG CCGAAGAATC TGGTTCAGGC
GTTGGAGGCG GTTCCGGTGG AGGATTTGGC GGCGGGGAAG ATACCGGTTC TGTAGATACT
TCTTGCGGCC AACCCTCAGG CGGTTCCGGT GGTTCGTCTG CTGGGAGCAG TTCAGGTAGC
GCCAGCGGAG GAAGTCAGGG GTTTGCTTCA TTCTCACGAG CTGGGCGCAT GGCAAGCCAT
ATGGGAAGCA GTATGGCTAA CGGAGCTGCT GAATACCAGA CAATGAGGCG AAGTAGCGAT
TCTTCTCGTG TCCAACGGAC TATTGGAGGG GAGTTGGCGA CTCAGATACG TAAACAAACA
GCTACTCGTC GGGATAACCG CGAACATGAT GATTTTGTCG AAGATAGCTT ATCCGGCAAT
AATAAATCTT GA
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| Protein sequence | MKIVSKLTFL GIILFFSINA YAGQLDSSGL LDTLLDKFQQ VASTWTTVIA DYANWLFWGL
VLISMVWTFG MMAMQGEGLT GVLAEIVRFF AVIGFFYYLL INGPSISQSI INSMRQLAAN
ALGISTGISP SSIVDMAFAI LTKVSSAASI WSPMISTIMI TVAIIVLVVM SLIAINMLIM
LVSAWVLCYA GVILLGFGGS KWTSDIAINY LRTVLSVGIQ LFTMTLIIGI GQSFIDQYFS
LIKDDVPDLN SLIVLLLASI ILLVLTNKLP LLLSGVVGGA SLQGIGGFGA GMITGAAATA
ISGAGAMAMG ASAQVSGGAS ALKAAFESAQ AAMAEESGSG VGGGSGGGFG GGEDTGSVDT
SCGQPSGGSG GSSAGSSSGS ASGGSQGFAS FSRAGRMASH MGSSMANGAA EYQTMRRSSD
SSRVQRTIGG ELATQIRKQT ATRRDNREHD DFVEDSLSGN NKS
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