Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2509 |
Symbol | |
ID | 5592501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2520647 |
End bp | 2521591 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640921630 |
Product | putative transporter YfdV |
Protein accession | YP_001459163 |
Protein GI | 157161845 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.122299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACAT TTTTTATTGG CGATTTATTG CCTATTATCG TAATCATGCT GTTGGGTTAT TTTAGCGGCA GACGAGAAAC ATTTTCAGAA GATCAAGCTC GGGCATTTAA TAAACTGGTA TTAAACTACG CGCTTCCTGC GGCTCTATTT GTATCTATTA CTCGGGCAAA CAGGGAAATG ATTTTTGCGG ACACTCGTCT GACCCTTGTA TCACTTGTGG TTATTGTCGG ATGTTTCTTT TTCTCCTGGT TCGGTTGCTA CAAATTTTTT AAACGTACCC ATGCAGAAGC AGCTGTATGT GCATTAATTG CAGGTTCACC TACCATTGGA TTCCTGGGGT TTGCAGTTCT CGATCCTATT TATGGTGATT CCGTATCAAC AGGTTTAGTG GTAGCAATTA TTTCTATTAT TGTTAACGCA ATTACTATTC CTATTGGTCT GTATTTGCTG AATCCTTCTT CAGGAGCGGA TGGTAAGAAG AATAGTAATC TGAGCGCATT AATTTCTGCG GCAAAGGAGC CAGTAGTATG GGCACCTGTT CTGGCAACGA TCCTGGTGTT GGTTGGGGTA AAAATTCCGG CAGCATGGGA CCCAACCTTT AATCTGATTG CGAAGGCTAA CTCAGGGGTA GCGGTATTCG CTGCGGGGTT GACTCTGGCT GCACATAAAT TCGAGTTCAG TGCCGAAATT GCTTATAACA CCTTCCTGAA GCTGATTCTG ATGCCACTGG CACTGCTTTT CGTTGGTATG GCATGTCATT TGAACAGCGA ACATCTGCAG ATGATGGTAC TGGCAGGCGC ATTACCGCCG GCATTCTCCG GAATCATTAT TGCCAGCCGG TTTAATGTCT ACACCCGTAC TGGTACAGCG TCATTGGCTG TGAGCGTACT GGGTTTTGTC GTCACGGCTC CCTTGTGGAT TTATGTCAGT CGACTGGTTT CATAA
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Protein sequence | MLTFFIGDLL PIIVIMLLGY FSGRRETFSE DQARAFNKLV LNYALPAALF VSITRANREM IFADTRLTLV SLVVIVGCFF FSWFGCYKFF KRTHAEAAVC ALIAGSPTIG FLGFAVLDPI YGDSVSTGLV VAIISIIVNA ITIPIGLYLL NPSSGADGKK NSNLSALISA AKEPVVWAPV LATILVLVGV KIPAAWDPTF NLIAKANSGV AVFAAGLTLA AHKFEFSAEI AYNTFLKLIL MPLALLFVGM ACHLNSEHLQ MMVLAGALPP AFSGIIIASR FNVYTRTGTA SLAVSVLGFV VTAPLWIYVS RLVS
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