Gene EcHS_A2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2396 
Symbol 
ID5592435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2405341 
End bp2405766 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content48% 
IMG OID640921521 
ProductNUDIX family hydrolase 
Protein accessionYP_001459055 
Protein GI157161737 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.64074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGACAAC GGACTATTGT ATGCCCTTTG ATTCAAAATG ATGGTGCTTA TTTGCTGTGT 
AAAATGGCCG ACGATCGCGG CGTTTTCCCC GGTCAATGGG CGCTTTCGGG TGGCGGCGTA
GAGCCTGGCG AACGAATTGA AGAGGCACTA CGCCGCGAAA TTCGCGAAGA ACTGGGAGAA
CAGCTGCTTT TGACAGAAAT CACGCCGTGG ACCTTCAGCG ATGATATTCG CACCAAGACG
TATGCAGATG GTCGCAAGGA AGAGATTTAT ATGATTTACC TGATTTTTGA CTGCGTTTCT
GCCAACCGAG AAGTGAAAAT AAACGAAGAG TTTCAGGACT ACGCGTGGGT AAAACCTGAA
GATCTGGTGC ACTATGATTT GAACGTTGCC ACCCGAAAAA CGTTACGTTT GAAAGGTCTT
CTGTAA
 
Protein sequence
MRQRTIVCPL IQNDGAYLLC KMADDRGVFP GQWALSGGGV EPGERIEEAL RREIREELGE 
QLLLTEITPW TFSDDIRTKT YADGRKEEIY MIYLIFDCVS ANREVKINEE FQDYAWVKPE
DLVHYDLNVA TRKTLRLKGL L