Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2364 |
Symbol | |
ID | 5594281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 2365738 |
End bp | 2367060 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640921491 |
Product | putative short chain fatty acid transporter |
Protein accession | YP_001459025 |
Protein GI | 157161707 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2031] Short chain fatty acids transporter |
TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGTC GCATATCGCG TTTTATGACG CGTTTTGTCA GCCGGTGGCT TCCCGATCCA CTGATCTTTG CCATGTTGCT GACATTGCTA ACATTCGTGA TCGCGCTTTG GTTAACACCA CAAACGCCGA TCAGCATGGT GAAAATGTGG GGTGACGGTT TCTGGAACTT GCTGGCGTTT GGTATGCAGA TGGCGCTTAT CATCGTTACC GGTCATGCCC TTGCCAGCTC TGCTCCGGTG AAAAGTTTGC TGCGTACTGC CGCCTCCGCC GCAAAGACGC CCGTACAGGG CGTCATGCTG GTCACTTTCT TCGGTTCAGT CGCTTGTGTC ATCAACTGGG GATTTGGTTT GGTTGTCGGC GCAATGTTTG CCCGTGAAGT CGCCCGGCGA GTCCCCGGTT CTGATTATCC GTTGCTCATT GCCTGCGCCT ACATTGGTTT TCTCACCTGG GGTGGCGGCT TCTCTGGATC AATGCCTCTG TTGGCTGCAA CACCGGGCAA CCCGGTTGAG CATATCGCCG GGCTGATCCC GGTGGGCGAT ACTCTGTTCA GTGGTTTTAA CATTTTCATC ACTGTGGCGT TGATTGTGGT GATGCCATTT ATCACCCGCA TGATGATGCC AAAACCGTCT GACGTGGTGA GTATCGATCC AAAACTACTC ATGGAAGAGG CTGATTTTCA AAAGCAGCTA CCGAAAGATG CCCCACCATC CGAGCGACTG GAAGAAAGCC GCATTCTGAC GTTGATCATC GGCGCACTCG GTATCGCTTA CCTTGCGATG TACTTCAGCG AACATGGCTT CAACATCACC ATCAATACCG TCAACCTGAT GTTTATGATT GCGGGTCTGC TGCTACATAA AACGCCAATG GCTTATATGC GTGCTATCAG CGCGGCAGCA CGCAGTACTG CCGGTATTCT GGTGCAATTC CCCTTCTACG CTGGGATCCA ACTGATGATG GAGCATTCCG GTCTGGGCGG ACTCATTACC GAATTCTTCA TCAATGTTGC GAACAAAGAC ACCTTCCCGG TAATGACCTT TTTTAGTTCT GCACTGATTA ACTTCGCCGT TCCGTCTGGC GGCGGTCACT GGGTTATTCA GGGACCTTTC GTGATACCCG CAGCCCAGGC GCTGGGCGCT GATCTCGGTA AATCGGTAAT GGCGATCGCC TACGGCGAGC AATGGATGAA CATGGCACAA CCATTCTGGG CGCTGCCAGC ACTGGCAATC GCCGGACTCG GTGTCCGCGA CATCATGGGC TACTGCATCA CTGCCCTGCT CTTCTCCGGT GTCATTTTCG TCATTGGTTT AACGCTGTTC TGA
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Protein sequence | MIGRISRFMT RFVSRWLPDP LIFAMLLTLL TFVIALWLTP QTPISMVKMW GDGFWNLLAF GMQMALIIVT GHALASSAPV KSLLRTAASA AKTPVQGVML VTFFGSVACV INWGFGLVVG AMFAREVARR VPGSDYPLLI ACAYIGFLTW GGGFSGSMPL LAATPGNPVE HIAGLIPVGD TLFSGFNIFI TVALIVVMPF ITRMMMPKPS DVVSIDPKLL MEEADFQKQL PKDAPPSERL EESRILTLII GALGIAYLAM YFSEHGFNIT INTVNLMFMI AGLLLHKTPM AYMRAISAAA RSTAGILVQF PFYAGIQLMM EHSGLGGLIT EFFINVANKD TFPVMTFFSS ALINFAVPSG GGHWVIQGPF VIPAAQALGA DLGKSVMAIA YGEQWMNMAQ PFWALPALAI AGLGVRDIMG YCITALLFSG VIFVIGLTLF
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