| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0396 |
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| Symbol | prpR |
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| ID | 5591597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 412848 |
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| End bp | 414434 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640919581 |
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| Product | propionate catabolism operon regulatory protein PrpR |
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| Protein accession | YP_001457166 |
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| Protein GI | 157159848 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATC CACCACGGCT TAATGACGAC AAACCGGTTA TCTGGACGGT ATCTGTAACG
CGCCTGTTCG AGCTGTTTCG CGATATCAGC CTCGAGTTTG ATCACCTGGC GAACATTACC
CCTATCCAGC TTGGCTTTGA AAAAGCAGTG ACCTATATCC GCAAGAAACT GGCAAACGAA
CGCTGCGACG CCGTCATCGC CGCTGGCTCT AACGGCGCGT ACCTGAAAAG CCGCCTGTCA
GTGCCAGTTA TTTTGATTAA ACCGAGCGGC TACGATGTGT TACAGGCACT GGCAAAAGCC
GGAAAGCTCA CCTCTTCTAT CGGCGTTGTC ACTTATCAGG AAACTATTCC GGCACTGGTG
GCGTTTCAAA AAACCTTTAA TTTGCGCCTC GATCAACGTA GCTACATTAC CGAAGAAGAC
GCCCGCGGGC AGATTAACGA GCTCAAAGCT AACGGCACCG AAGCGGTGGT CGGTGCGGGG
CTGATTACCG ATCTGGCAGA AGAAGCCGGA ATGACCGGAA TTTTTATCTA TTCCGCCGTC
ACCGTGCGCC AGGCGTTCAG CGATGCGCTG GATATGACGC GCATGTCGTT ACGCCATAAC
ACTCACGATG CCACCCGCAA CGCCCTGAGA ACTCGTTACG TGCTGGGCGA TATGCTCGGT
CAATCACCAC AGATGGAACA AGTACGGCAG ACTATTTTGC TGTATGCCCG CTCCAGTGCG
GCGGTGTTGA TTGAAGGGGA AACGGGGACG GGCAAAGAGC TGGCGGCCCA GGCGATTCAT
CGGGAATATT TTGCCCGCCA CGATGCGCGA CAGGGCAAAA AGTCGCATCC GTTTGTTGCC
GTCAACTGCG GGGCGATAGC CGAATCGCTG CTGGAAGCGG AGCTGTTTGG CTATGAGGAA
GGGGCGTTTA CCGGCTCGCG ACGCGGAGGT CGCGCCGGGC TGTTCGAAAT TGCCCACGGC
GGTACGCTGT TTCTGGATGA GATTGGCGAA ATGCCGCTAC CTTTGCAGAC TCGCCTGTTA
CGGGTGCTGG AAGAAAAAGA GGTTACTCGC GTCGGCGGGC ATCAGCCTGT TCCGGTGGAT
GTGCGGGTCA TTAGCGCCAC TCACTGCAAT CTGGAAGAAG ATATGCGGCA AGGGCAGTTT
CGCCGTGATC TGTTTTATCG GCTGAGTATT TTGCGTCTGC AATTGCCACC ACTGCGCGAG
CGGGTGGCGG ATATTCTTCC GCTGGCGGAA AGCTTTTTGA AAGTGTCTCT GGCGGCGCTC
TCCGCCCCGT TTTCTGCCGC ATTACGCCAG GGATTACAGG CAAGCGAAAC CGTGCTGGTG
CACTACGACT GGCCAGGCAA TATTCGTGAA CTGCGCAATA TGATGGAACG ACTGGCGCTG
TTTTTAAGTG TGGAACCGAC GCCGGATTTA ACGCCGCAGT TTATGCAACT GCTACTGCCG
GAGCTGGCGC GCGAGTCGGC GAAAATTCCC GCTCCACGCT TACTGACACC ACAACAGGCA
CTGGAGAAAT TTAAAGGCGA TAAAACAGCA GCGGCGAATT ATTTAGGCAT AAGCCGGACG
ACGTTCTGGC GGCGGCTGAA AAACTGA
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| Protein sequence | MAHPPRLNDD KPVIWTVSVT RLFELFRDIS LEFDHLANIT PIQLGFEKAV TYIRKKLANE
RCDAVIAAGS NGAYLKSRLS VPVILIKPSG YDVLQALAKA GKLTSSIGVV TYQETIPALV
AFQKTFNLRL DQRSYITEED ARGQINELKA NGTEAVVGAG LITDLAEEAG MTGIFIYSAV
TVRQAFSDAL DMTRMSLRHN THDATRNALR TRYVLGDMLG QSPQMEQVRQ TILLYARSSA
AVLIEGETGT GKELAAQAIH REYFARHDAR QGKKSHPFVA VNCGAIAESL LEAELFGYEE
GAFTGSRRGG RAGLFEIAHG GTLFLDEIGE MPLPLQTRLL RVLEEKEVTR VGGHQPVPVD
VRVISATHCN LEEDMRQGQF RRDLFYRLSI LRLQLPPLRE RVADILPLAE SFLKVSLAAL
SAPFSAALRQ GLQASETVLV HYDWPGNIRE LRNMMERLAL FLSVEPTPDL TPQFMQLLLP
ELARESAKIP APRLLTPQQA LEKFKGDKTA AANYLGISRT TFWRRLKN
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