| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_D0036 |
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| Symbol | |
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| ID | 5585758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009788 |
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| Strand | - |
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| Start bp | 31844 |
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| End bp | 34462 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640913854 |
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| Product | fimbrial usher family protein |
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| Protein accession | YP_001451504 |
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| Protein GI | 157149430 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGTG GAAAGTCGAG CAAGGTGGTC ATTGTGTTAT CCGTTCTTAT TGGATCTTCT
TCCGGATTTG CCAGCAAATA CAACCTTGTT GATATTCCGG AGTCTTTTCG TGATTTATGG
GGAGAGCAGG ACGAATTACT CGAAGTCAGA CTTTATGGGC AATCTCTTGG CGTTCATCGT
ATTAAGTCCA CTCCTACTAC TGTGGCATTT GAGTCTCCGG ATAATTTATT AGATAAAATT
GAGATTAATA AAGGAAAGGA AGCTGACTTA AGAGTACTTA TGCGAGGTTC ATTCCAACGG
AATGGAAATA TGAGTTGCCA GGGATATACG GGACAGAACA ACTGCAATTA CATTAAAACA
AACACAGTTG CGGTTATCGT AGATGATGTT GAAAATGTAC TTAATCTTTT TATAGGAAAT
GAGTTTCTTG CTTCCGGAGA GAATGACAGT GATTATTATC AGCCATCCAA GAACACAAAA
AAAGCATTCA TACATAGCCA GACAATTAAT TTATCTGATA CCGGTAATTA TGAAAACTTG
TCCATTGTCG GGACGGGTTC GCTTGGGATA ACAGATAACA GTTATGCTAT TTTGGGTTGG
GCAGCAAATT ATAATCGGTA TAAATCTTAC AATTACAATG AACAGTCGAT TAACAGCCTG
TATTTCAGAC ATGATTTTGA AAAAAATTTT TACTATCAGT TGGGACGGAT AGACAGATCC
GACTTATCGC AAAGTAGTGG CGGAAACTTT AACTTCGATC TACTTCCTGT ACCTGATATT
TATGGTATGA GAGCCGGAAC GACTCAGTCA TATATCAAGA ATACGGGAAA GTCAGTTGCA
TCTCCGGTCA CAATTATGCT GACCCACTTT TCCCGTGTAG AAGCATATCG AAATGGGCAA
TTACTGGGAG TTTGGTATTT AGATGCAGGT ATCAGTGAGT TAGATACGGA GCGTTTACCT
GACGGAAATT ACGATCTGAA ATTAAAAATA TTTGAGCAGG AGCAACTTGT CCGTGAAGAA
ATTGTACCTT TTAACAAATC AGGTTCTTCA ATTGGTGACA CGCATTGGGA TGTTTTCGTG
CAGGCAGGCG ATATTATAAA TGATAATGGC CGATATGTTG AAAAACAGAA AAACCATAAA
TCAGCCATTA ATAGTGGATT ACGTTTACCG TTAACAAGGA ATCTTGCAGT ACAGCTGGGG
GGGGCTGTTA TTGATAATAA AAATTATTAC GAGACTGGGA TTCTGTGGAA CTCAGGACTC
CTTGATGGTT CTCTCAATAG CAAATTCACT TTCCTTTTTG GTGACGACAC ACATGGAAAC
TATCAGAATG TTTCCTATAC TGATGGTTTC AGCTTATCGT TCTATCATAA TGATAAGCGA
GTTGATGATT GTGGTAAAGA TTACAATATG GGCTGGAGTG GATGTTATGA GTCTTATTCA
GCGTCTTTAA GTATCCCTGT GAAAGGGTGG AATAGCACTC TTGCATACAG TAATACGTAC
AGTACGTCTG TATACAGATA TGATGCTGTT TCTGAATATG TTCCTTATTA CTATTATAAA
GGAAGAACTA AAAGATGGCA ACTTACTGCT TCTACGGTGG TAAGATGGGG GGACTATAAC
ATTATGCCAA CAATAGGAGT ATATAATAGT GAACAGAAAC AATGGGCTGA TAAAGGAGGC
TATTTATCCT TAACGCTTAC TCGAGTTGAT GGTGGCAAGT CCTTGAATGC TGGTTATTCC
TATAACTACT CCCGGGGTAA TTATACTTCT AATGATGCAT TTGTTGAGGG GCATCTGGTT
TCAGATACAA ATGTCAGTTA TCGTGAACTA AGTGCACGCG TCAGTGGTAA TAGATATTAC
ACTGAGGGAG GAGTTTCAGG GCGCATTAAC AATAGATTTG GTGATCTGAA TGGGACACTT
AATGTTAATA AAAACAGAAA ATCACATGAT ACAACTCACT CTCTGACAGC TGGTTACAGT
TCGTCATTTG CTCTTACGAC CGATGGCATC TACTGGGGAG GAAGCGCATC CGGGCTGACG
AATTTATCCG GAGGAATTGT AAGAGTAAAA TCAAATGAGG ATGAGAGTGA ACTATTGAAT
GTGAAAGGCT CATCATATGG TCATTATTCC CTGGGCAGCA ATGATAGTTT ATTTATACCT
GTACCTGCCC TGATGCAAGC CAGCCTTACT ATTGAAGAGA ATACAAATAA ATCTAAAAAT
ATTGATGTGC TCGCACCAAC AAAAAACACT TTTTTTATGT TACCTGGAAG TGTTTATCCT
ATTGATGTTT CAGCCAATGT TAGTTTTACT TACGTTGGAC GTGGAGTTGA TGTTAAGGGA
CGACCTTTAT CTGGTGCATA TATTTTGAAT GCGCAAAATA TTGTGTTGGA TGAAAATGGT
GGATTTTCTT TTGAGAGTTC AGAGAATGAG AAGGAACTCT TTTTATTAAA AGATAAAACA
ATTTATTCCT GTTCATTAGA CAGAAGCGAA ATGCGCAATG GTATTGCTTT CGTTGGTGAG
GTTGCATGCA ATTCTACCAT CAAAGAACTT CTTCCTGAAA AATTGGTTAC AAATTCTCGC
ATTCATGATT TATTAGCTTA CAATCAGGAT ACTGAATGA
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| Protein sequence | MIGGKSSKVV IVLSVLIGSS SGFASKYNLV DIPESFRDLW GEQDELLEVR LYGQSLGVHR
IKSTPTTVAF ESPDNLLDKI EINKGKEADL RVLMRGSFQR NGNMSCQGYT GQNNCNYIKT
NTVAVIVDDV ENVLNLFIGN EFLASGENDS DYYQPSKNTK KAFIHSQTIN LSDTGNYENL
SIVGTGSLGI TDNSYAILGW AANYNRYKSY NYNEQSINSL YFRHDFEKNF YYQLGRIDRS
DLSQSSGGNF NFDLLPVPDI YGMRAGTTQS YIKNTGKSVA SPVTIMLTHF SRVEAYRNGQ
LLGVWYLDAG ISELDTERLP DGNYDLKLKI FEQEQLVREE IVPFNKSGSS IGDTHWDVFV
QAGDIINDNG RYVEKQKNHK SAINSGLRLP LTRNLAVQLG GAVIDNKNYY ETGILWNSGL
LDGSLNSKFT FLFGDDTHGN YQNVSYTDGF SLSFYHNDKR VDDCGKDYNM GWSGCYESYS
ASLSIPVKGW NSTLAYSNTY STSVYRYDAV SEYVPYYYYK GRTKRWQLTA STVVRWGDYN
IMPTIGVYNS EQKQWADKGG YLSLTLTRVD GGKSLNAGYS YNYSRGNYTS NDAFVEGHLV
SDTNVSYREL SARVSGNRYY TEGGVSGRIN NRFGDLNGTL NVNKNRKSHD TTHSLTAGYS
SSFALTTDGI YWGGSASGLT NLSGGIVRVK SNEDESELLN VKGSSYGHYS LGSNDSLFIP
VPALMQASLT IEENTNKSKN IDVLAPTKNT FFMLPGSVYP IDVSANVSFT YVGRGVDVKG
RPLSGAYILN AQNIVLDENG GFSFESSENE KELFLLKDKT IYSCSLDRSE MRNGIAFVGE
VACNSTIKEL LPEKLVTNSR IHDLLAYNQD TE
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